Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I24
         (1220 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    25   1.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   4.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   4.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   7.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 218 LDMCYFCFDVLYCQLHSMEPPQTPK 292
           LD CYFC D      H  +PP +P+
Sbjct: 424 LDKCYFCLDGKL--PHDDQPPLSPQ 446


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 245 HQNKNNTYRVSLQNRGNHSKVDQHCYYKNDLV 150
           H N N  Y  + +   N++  ++  YYKN ++
Sbjct: 91  HNNNNYKYNYNNKYNYNNNNYNKKLYYKNYII 122


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 216 YSICVIFVLMFYTASYTVWNHRRRPNSQTRPIL 314
           Y  C+I V ++Y     + N  R+  +  +P L
Sbjct: 353 YIPCIIMVFLYYNIFKALRNRARKARANRKPNL 385


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 497 QHFEEAEHYLDWKLGKH 547
           QH     H  +WK+G H
Sbjct: 508 QHLPRIHHDAEWKVGNH 524


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 497 QHFEEAEHYLDWKLGKH 547
           QH     H  +WK+G H
Sbjct: 423 QHLPRIHHDAEWKVGNH 439


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 497 QHFEEAEHYLDWKLGKH 547
           QH     H  +WK+G H
Sbjct: 742 QHLPRIHHDAEWKVGNH 758


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 257 GSIKHQNKNNTYRVSLQNRGNHSKVDQHCY 168
           G + H N+ N Y++ L+N       D   Y
Sbjct: 665 GYVSHANQRNMYKLDLKNMKYTRSADLSSY 694


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 451  YRRKSRVSQSTCNSIFTQ 398
            YRR+  V+++ C+  F+Q
Sbjct: 965  YRRRLNVNETVCSDYFSQ 982


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,434
Number of Sequences: 438
Number of extensions: 4676
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41541798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)