Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I19
         (1321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0610 - 22715637-22716797                                         31   1.5  
04_04_0720 - 27543998-27544230,27544339-27544432,27544571-275448...    30   3.5  
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996...    30   4.7  
10_08_0914 + 21535519-21535797,21535961-21536339,21536425-215365...    29   8.2  

>06_03_0610 - 22715637-22716797
          Length = 386

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
 Frame = +3

Query: 414 IDSITTQIN--VLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNI 587
           ID I +++   + K Q+  +++   A H+ ++ + + K+NEL    Q+E  Q    E N+
Sbjct: 28  IDQIVSEVEQAITKMQMMNTDSMGTADHSSILAELKAKLNELAPLNQLEGCQ---KELNV 84

Query: 588 NLSELDNILQ 617
            LS+   +L+
Sbjct: 85  ALSKYLKLLE 94


>04_04_0720 -
           27543998-27544230,27544339-27544432,27544571-27544898,
           27545387-27545850
          Length = 372

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +2

Query: 227 WAGGIRSRRGLYGTXQAICNAPTGQRXACSAGSSGLDGGGTCTSAVACS 373
           W GG  S R L+    A+ N   G+     AGSS L GG   + AV+ S
Sbjct: 14  WRGGETSAR-LHQGAAAMSNPAGGKHLVRLAGSSSLRGGAALSPAVSIS 61


>10_06_0039 -
           9966744-9967535,9968241-9968482,9969021-9969223,
           9969333-9970645
          Length = 849

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 296 GQRXACSAGSSGLDGGGTCTSAVACS-QLCPASPSSAPT 409
           GQR A S G  G +GGGT + A A S +   AS  S P+
Sbjct: 229 GQRSAGSGGGGGGEGGGTWSEASASSPRTTTASRRSLPS 267


>10_08_0914 +
           21535519-21535797,21535961-21536339,21536425-21536568,
           21536681-21536730,21536820-21536877,21536979-21537208
          Length = 379

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -2

Query: 369 QATAEVQVPPPSRPLDPAEQAXR-WPVGALHIA 274
           +  A   +PPP  PL+P E   R W V A  I+
Sbjct: 23  EEAAAAAIPPPQTPLEPMEYLSRSWSVSASEIS 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,151,796
Number of Sequences: 37544
Number of extensions: 547426
Number of successful extensions: 1858
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1851
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)