Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I19
         (1321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.40 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    28   0.53 
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    26   2.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   4.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   4.9  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    24   8.6  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    24   8.6  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.7 bits (61), Expect = 0.40
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +3

Query: 417  DSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLS 596
            D +T  +  LK+QI Q +  +N+Q   L  +   + ++L+ +     L+I   EN I   
Sbjct: 860  DEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQR-DKLLKQNDELKLEIKKKENEITKV 918

Query: 597  ELDN 608
              +N
Sbjct: 919  RNEN 922


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 0.53
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 474  NLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLSELD-NILQPIIDS-CTKDS 647
            N   QH    QQQQ +  +   + Q +   ++A +  +  S++D    QP+ +S C ++ 
Sbjct: 897  NYRQQHQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQMDQGTDQPMQESPCNEEK 956

Query: 648  ISSG 659
            I +G
Sbjct: 957  IGAG 960


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 265 HXTGNM*CPNRPARR 309
           H TG++ CPNR ARR
Sbjct: 382 HITGSLRCPNRIARR 396


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +2

Query: 389 SPSSAPTRNRQHHNTDQCAERTDYSVRK*SKCSTCCFDTTAAS 517
           SP SAP+    HH++      T  ++   S    C   T+  S
Sbjct: 8   SPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTS 50


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +2

Query: 389 SPSSAPTRNRQHHNTDQCAERTDYSVRK*SKCSTCCFDTTAAS 517
           SP SAP+    HH++      T  ++   S    C   T+  S
Sbjct: 8   SPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTS 50


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 7/17 (41%), Positives = 16/17 (94%)
 Frame = -1

Query: 460 VICSFSTLICVVMLSIS 410
           ++ +FST+ICV+++++S
Sbjct: 315 LLTAFSTIICVIVMNLS 331


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 112 QVTNKKITQNXVSCXAARPSTPLN 183
           Q+ N  +T N V    +RP+TP N
Sbjct: 425 QLGNPGVTVNSVGVQLSRPNTPAN 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 986,705
Number of Sequences: 2352
Number of extensions: 19748
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152462631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)