Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_I19
(1321 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 75 9e-14
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 75 9e-14
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 40 0.005
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 38 0.016
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 33 0.45
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 33 0.45
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 31 1.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 31 1.4
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 31 1.4
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 29 5.5
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 29 5.5
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 5.5
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 29 5.5
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 29 9.7
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 29 9.7
AL034489-5|CAA22467.1| 383|Caenorhabditis elegans Hypothetical ... 29 9.7
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 29 9.7
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ... 29 9.7
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 75.4 bits (177), Expect = 9e-14
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Frame = +3
Query: 390 PLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIM 569
P P EI +I+ L+++I SE NLNA + + + + ++ ++ M
Sbjct: 39 PSLMDPPEIVEWRKKIDELRQKIIDSEQNLNAHRNGMDELLMAHLKSAIRTSETMKIEKM 98
Query: 570 ADENNINLSELDNILQPIID-SCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQTG 746
+NN+N+ +L++ L + C+KD IS K WI ++ TS ++I LL KV
Sbjct: 99 LSQNNLNVEDLNSYLDAMATPKCSKDLISQAKKWIFEYCTSDQLREIILSFLLNKVKDEA 158
Query: 747 AAFTQKLHIIYLVK*CTPSLCTQKRRRSQEK 839
+ +LHI+YL+ C +K+ +Q K
Sbjct: 159 SGEYLRLHILYLIN-DWAFHCQRKKEENQMK 188
Score = 37.1 bits (82), Expect = 0.028
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 781 LLNDVLHHCARKNAEDLKKNLENVVVPMFCNA-SIAVTEEQEAKL-NKLLRLWESKSNYF 954
L+ND HC RK E+ K L V M+ ++ + E KL KLL WE + YF
Sbjct: 170 LINDWAFHCQRKKEENQMKMLARYVPKMYAYCIELSSSSELSNKLEGKLLGEWEGR-QYF 228
Query: 955 EXAVLKNEEST 987
+V K +T
Sbjct: 229 ADSVFKQLRNT 239
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 75.4 bits (177), Expect = 9e-14
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Frame = +3
Query: 390 PLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIM 569
P P EI +I+ L+++I SE NLNA + + + + ++ ++ M
Sbjct: 39 PSLMDPPEIVEWRKKIDELRQKIIDSEQNLNAHRNGMDELLMAHLKSAIRTSETMKIEKM 98
Query: 570 ADENNINLSELDNILQPIID-SCTKDSISSGKGWILQHATSHDAGKVISQHLLRKVTQTG 746
+NN+N+ +L++ L + C+KD IS K WI ++ TS ++I LL KV
Sbjct: 99 LSQNNLNVEDLNSYLDAMATPKCSKDLISQAKKWIFEYCTSDQLREIILSFLLNKVKDEA 158
Query: 747 AAFTQKLHIIYLVK*CTPSLCTQKRRRSQEK 839
+ +LHI+YL+ C +K+ +Q K
Sbjct: 159 SGEYLRLHILYLIN-DWAFHCQRKKEENQMK 188
Score = 37.1 bits (82), Expect = 0.028
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 781 LLNDVLHHCARKNAEDLKKNLENVVVPMFCNA-SIAVTEEQEAKL-NKLLRLWESKSNYF 954
L+ND HC RK E+ K L V M+ ++ + E KL KLL WE + YF
Sbjct: 170 LINDWAFHCQRKKEENQMKMLARYVPKMYAYCIELSSSSELSNKLEGKLLGEWEGR-QYF 228
Query: 955 EXAVLKNEEST 987
+V K +T
Sbjct: 229 ADSVFKQLRNT 239
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +3
Query: 366 LAVNSAPPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKA 545
L APPP H + + ++ N E+ + N H V++ Q+V+ N V +
Sbjct: 24 LPPRGAPPPTAYHASRMAATSSSTNGSFEK-SAIPGNARKLHVVIVIDQKVQKNLRVREM 82
Query: 546 QMESLQIMADENNINLSELD 605
++ +Q +AD N+NL+ +D
Sbjct: 83 ALKDVQKVADTLNVNLTRID 102
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 37.9 bits (84), Expect = 0.016
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +2
Query: 266 TXQAICNAPTGQRXACSAGSSGLDGGGTCTSAVACSQLCPASPSSAPTRNRQHH 427
T QA+C T C +GSS + GG + A S CP S P+ N QHH
Sbjct: 819 TGQAVCCTNTNV-IRCPSGSSVFEYGGRPLACPAGSNKCPQGYSCMPSTNPQHH 871
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 33.1 bits (72), Expect = 0.45
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 369 AVNSAPPPLPQHPQEIDSITTQINVLKEQITQSEN-NLNAQHAVLIQQQQVKINELVSKA 545
A+ S PPP+P P + + T + V +Q + N N++ QH+ ++E +
Sbjct: 1246 AITSCPPPVPSVPPVVSNGTLNLEVAPKQTPSATNQNVDTQHSSSTASTATLVSETPATV 1305
Query: 546 QMESLQIMA 572
+ + + A
Sbjct: 1306 HVTPISVPA 1314
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 33.1 bits (72), Expect = 0.45
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 369 AVNSAPPPLPQHPQEIDSITTQINVLKEQITQSEN-NLNAQHAVLIQQQQVKINELVSKA 545
A+ S PPP+P P + + T + V +Q + N N++ QH+ ++E +
Sbjct: 1246 AITSCPPPVPSVPPVVSNGTLNLEVAPKQTPSATNQNVDTQHSSSTASTATLVSETPATV 1305
Query: 546 QMESLQIMA 572
+ + + A
Sbjct: 1306 HVTPISVPA 1314
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 384 PPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQ 563
PPP P P+++ +QIT+ + + + +Q+ +I+ L +A +
Sbjct: 6458 PPPQPAEPEQLAEYEATKESEHQQITEGDVPQEEEETEMRRQETERIHSLAMEASSDLGN 6517
Query: 564 IMADENNINLSELDNILQPIIDSCTK-DSISSGKGWILQHATSHDAGK 704
+ + LS+L + + D+ + +S SG L+ + AGK
Sbjct: 6518 SESSRYSRQLSDLSSSAESHADTVIRVESERSGSSDSLEVVSVISAGK 6565
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 384 PPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQ 563
PPP P P+++ +QIT+ + + + +Q+ +I+ L +A +
Sbjct: 6458 PPPQPAEPEQLAEYEATKESEHQQITEGDVPQEEEETEMRRQETERIHSLAMEASSDLGN 6517
Query: 564 IMADENNINLSELDNILQPIIDSCTK-DSISSGKGWILQHATSHDAGK 704
+ + LS+L + + D+ + +S SG L+ + AGK
Sbjct: 6518 SESSRYSRQLSDLSSSAESHADTVIRVESERSGSSDSLEVVSVISAGK 6565
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 384 PPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQ 563
PPP P P+++ +QIT+ + + + +Q+ +I+ L +A +
Sbjct: 333 PPPQPAEPEQLAEYEATKESEHQQITEGDVPQEEEETEMRRQETERIHSLAMEASSDLGN 392
Query: 564 IMADENNINLSELDNILQPIIDSCTK-DSISSGKGWILQHATSHDAGK 704
+ + LS+L + + D+ + +S SG L+ + AGK
Sbjct: 393 SESSRYSRQLSDLSSSAESHADTVIRVESERSGSSDSLEVVSVISAGK 440
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/54 (25%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 414 IDSITTQINVLKEQITQSENNLNAQHAVLIQQQ-QVKI-NELVSKAQMESLQIM 569
I+++ +++ K ++ ++EN ++ H QQ+ Q + N+LV+K ++L++M
Sbjct: 65 IENLMSELKTAKSKLNETENQISDLHEATKQQESQANLWNDLVAKISDKNLEMM 118
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 369 AVNSAPPPLPQHPQEIDSITTQINVLKEQITQSENNL--NAQHAVLIQQQQVKINELVSK 542
A +AP P+ HPQ + Q N L +T +N + + VL QQV + L K
Sbjct: 59 AYATAPYPMATHPQLANFNRFQTNQLNLGLTTQQNMMISRRKRRVLFSPQQVHV--LERK 116
Query: 543 AQMESLQIMADENNI 587
Q+ AD N+
Sbjct: 117 FQINRYLSAADRENL 131
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 865 FCNASIAVTEEQEAKLNKLLRLWESKSNYFEXAVLKNEESTSSYQXFKRXISQHA 1029
F A+ EE KL L + + KS + +LK+ TSS+ F + + Q A
Sbjct: 34 FSKEKAAIEEEYSTKLRSLAKKYAKKSEE-DDEILKSVSYTSSFNSFLQQLDQIA 87
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 865 FCNASIAVTEEQEAKLNKLLRLWESKSNYFEXAVLKNEESTSSYQXFKRXISQHA 1029
F A+ EE KL L + + KS + +LK+ TSS+ F + + Q A
Sbjct: 34 FSKEKAAIEEEYSTKLRSLAKKYAKKSEE-DDEILKSVSYTSSFNSFLQQLDQIA 87
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/78 (20%), Positives = 40/78 (51%)
Frame = +3
Query: 414 IDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINL 593
+D ++ VLKEQ+ ++++ L + + Q+ KI EL + ++++ Q + E
Sbjct: 390 LDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQEL--EKELQNAQKRSSEELETA 447
Query: 594 SELDNILQPIIDSCTKDS 647
+E+ L +++ ++
Sbjct: 448 NEMVRSLTATLENSNSET 465
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/78 (20%), Positives = 40/78 (51%)
Frame = +3
Query: 414 IDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINL 593
+D ++ VLKEQ+ ++++ L + + Q+ KI EL + ++++ Q + E
Sbjct: 390 LDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQEL--EKELQNAQKRSSEELETA 447
Query: 594 SELDNILQPIIDSCTKDS 647
+E+ L +++ ++
Sbjct: 448 NEMVRSLTATLENSNSET 465
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +2
Query: 299 QRXACSAGSSGLDGGGTCTSAVACSQLCPASPSSAPTRNRQHHNTDQCAERTD 457
+R C+ SG G G+C+ V C C + A + DQC + D
Sbjct: 42 KRQCCAMCPSGNCGCGSCSGFVTCPDRCQPMCTQACVMAKTSVCVDQCMPKCD 94
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 498 LIQQQQVKINELVSKAQMESLQIMADENNINLSE 599
L+ QQQ KINELV Q + + INL++
Sbjct: 774 LLTQQQAKINELVKLIQKNHDTLREQQQQINLAK 807
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
F30H5.3 protein.
Length = 1599
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 293 TGQRXACSAGSSGLDGGGTCTSAVACSQLC 382
TG+ +C+ G S G +C A++ +QLC
Sbjct: 1166 TGEPQSCAIGQSTCPSGYSCQRAISGAQLC 1195
>AL034489-5|CAA22467.1| 383|Caenorhabditis elegans Hypothetical
protein Y7A5A.7 protein.
Length = 383
Score = 28.7 bits (61), Expect = 9.7
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +3
Query: 381 APPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESL 560
+P P+PQ +E + + Q +K+ I +S + Q I+ ++ N L K + + +
Sbjct: 203 SPEPMPQLFREEPTTSEQSASIKDCILKSTRSYQKQATKDIEDKRTIFNALYKKCEEDQV 262
Query: 561 QI-MADENNINLSELDNILQPI-IDSCTKDSISS 656
+ +E L + N + I D C + I++
Sbjct: 263 AFRIQNETTALLDNIPNFVNGIPNDFCLQSGINT 296
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 381 APPP-LPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMES 557
APP Q I T + + Q+T N Q+ +L QQQQ + E + Q+++
Sbjct: 186 APPAQASQATSAAQQIATSMGLQPAQVTDLVNQHAQQYLLLQQQQQQQQREQQQQQQLQA 245
Query: 558 LQI 566
Q+
Sbjct: 246 QQV 248
>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
protein Y102A11A.3 protein.
Length = 1571
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +3
Query: 375 NSAPPPLPQHPQEIDSITTQINVLKEQITQSENNLNAQHAVL--IQQQQVKIN--ELVSK 542
N P L + Q Q++ +I ++N+N + I + + K+N E+V
Sbjct: 569 NLPPVLLNSNTQPETDFEFQVDTSTSEILSDQSNMNITFEPIEDIAEDRPKLNGEEIVQV 628
Query: 543 AQMESLQIMADENNINLSELDNI 611
MES +NINLSE ++
Sbjct: 629 QIMESTSRSTAPSNINLSENSDV 651
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,509,811
Number of Sequences: 27780
Number of extensions: 435863
Number of successful extensions: 1440
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3694370690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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