Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I12
         (1294 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0469 + 3638493-3641166,3641286-3641653                           31   2.0  
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349...    30   3.5  
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458...    29   8.0  

>11_01_0469 + 3638493-3641166,3641286-3641653
          Length = 1013

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -3

Query: 650 CVHDVFAFQLPSGFALLPCQQSPGYIQKNQLCYSFPLILIS 528
           CV++     +P+ FA LP  Q+  Y+  NQL  SFP +L++
Sbjct: 197 CVYNHIEGNIPNEFAKLPNLQTL-YVGSNQLSGSFPQVLLN 236


>10_08_0289 +
           16534063-16534100,16534219-16534243,16534847-16534978,
           16535255-16535441,16536014-16536189,16536282-16536377,
           16536511-16536615,16536654-16536683,16536698-16536784,
           16536874-16536963,16537033-16537113,16537200-16537268,
           16537413-16537490,16537578-16537673,16537981-16538080,
           16538208-16538311,16538396-16538501,16538595-16538673,
           16538861-16538963
          Length = 593

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +3

Query: 249 GXDVALEVVLTHRIVNEGGQXQXVVIGARNLQRGSAVVAEIVTLNETEAENGIAVGKEIV 428
           G       VLT  I  EG +     + A +L+RG ++  + V  N       I+  +EI 
Sbjct: 126 GDGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIA 185

Query: 429 VVSEIGT--EKVIKEMI-KEMDLV 491
            V  I    E+ I E+I K M+ V
Sbjct: 186 QVGTISANGEREIGELIAKAMEKV 209


>09_06_0067 -
           20645012-20645095,20645365-20645466,20645583-20645828,
           20646042-20646236,20646343-20646636,20646952-20647134,
           20647534-20647593,20647796-20648002,20648081-20648282,
           20648367-20648494,20648759-20648842,20648955-20649134,
           20649281-20649372,20649620-20649789,20650226-20650337,
           20650451-20650554,20651262-20651371
          Length = 850

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 327 GARNLQRGSAVVAEIVTLNETEAENGIAVGKEI 425
           G RNL+R  A +A    +   E ++ + +GKEI
Sbjct: 559 GVRNLERNLAALARAAAVKVAEQDSALRLGKEI 591


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,183,055
Number of Sequences: 37544
Number of extensions: 237696
Number of successful extensions: 566
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4027319592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)