SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I10
         (1299 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF272973-1|AAK58687.1|  268|Homo sapiens EAF1 protein.                 35   0.56 
BC041329-1|AAH41329.1|  268|Homo sapiens ELL associated factor 1...    35   0.75 
BC150277-1|AAI50278.1| 1441|Homo sapiens MAGI2 protein protein.        33   1.7  
AF038563-1|AAC05370.1| 1455|Homo sapiens membrane associated gua...    33   1.7  
AC004808-1|AAC23438.1|  434|Homo sapiens unknown protein.              33   1.7  
AB014605-1|BAA31680.2| 1483|Homo sapiens KIAA0705 protein protein.     33   1.7  
BX537956-1|CAD97923.1|  665|Homo sapiens hypothetical protein pr...    33   3.0  
BC065271-1|AAH65271.1|  665|Homo sapiens armadillo repeat contai...    33   3.0  
BC004514-1|AAH04514.2|  537|Homo sapiens ARMC9 protein protein.        33   3.0  
AY929062-1|AAX22760.1|  665|Homo sapiens melanoma/melanocyte spe...    33   3.0  
AY219922-1|AAO63554.1|  665|Homo sapiens ARM protein protein.          33   3.0  
AK022646-1|BAB14153.1|  508|Homo sapiens protein ( Homo sapiens ...    33   3.0  
AB058771-1|BAB47497.1|  463|Homo sapiens KIAA1868 protein protein.     33   3.0  
BC024159-1|AAH24159.2|  858|Homo sapiens leucine rich repeat con...    32   4.0  
AL391497-3|CAH72226.1|  858|Homo sapiens leucine rich repeat con...    32   4.0  
AL391497-2|CAH72225.1|  313|Homo sapiens leucine rich repeat con...    32   4.0  
AL391497-1|CAH72224.1|  117|Homo sapiens leucine rich repeat con...    32   4.0  

>AF272973-1|AAK58687.1|  268|Homo sapiens EAF1 protein.
          Length = 268

 Score = 35.1 bits (77), Expect = 0.56
 Identities = 21/82 (25%), Positives = 40/82 (48%)
 Frame = +3

Query: 600 GDELLKTQPHVVANSGHESIIKTISEPKQNDSLDIIVSAGTNEKPKDKAIQSPEGSSSPI 779
           GDE+  T PH+  ++   ++ K    P Q D + +I++  T E   +K   S +   +  
Sbjct: 55  GDEVTITLPHIPGSTPPMTVFKGNKRPYQKDCV-LIINHDTGEYVLEKLSSSIQVKKTRA 113

Query: 780 NASSKLPPVNEQETLKQAKSNQ 845
             SSK+    EQ+  +  +++Q
Sbjct: 114 EGSSKIQARMEQQPTRPPQTSQ 135


>BC041329-1|AAH41329.1|  268|Homo sapiens ELL associated factor 1
           protein.
          Length = 268

 Score = 34.7 bits (76), Expect = 0.75
 Identities = 21/82 (25%), Positives = 40/82 (48%)
 Frame = +3

Query: 600 GDELLKTQPHVVANSGHESIIKTISEPKQNDSLDIIVSAGTNEKPKDKAIQSPEGSSSPI 779
           GDE+  T PH+  ++   ++ K    P Q D + +I++  T E   +K   S +   +  
Sbjct: 55  GDEVTITLPHIPGSTPPMTVFKGNKRPYQKDCV-LIINHDTGEFVLEKLSSSIQVKKTRA 113

Query: 780 NASSKLPPVNEQETLKQAKSNQ 845
             SSK+    EQ+  +  +++Q
Sbjct: 114 EGSSKIQARMEQQPTRPPQTSQ 135


>BC150277-1|AAI50278.1| 1441|Homo sapiens MAGI2 protein protein.
          Length = 1441

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
 Frame = +3

Query: 582  CKFYKWGDELLKTQPHVVANSGHESIIKTISEPKQNDSLDII--------VSAGTNEKPK 737
            C   K GD +L      + N  H  I+K I +   + +L II         SA ++EK  
Sbjct: 952  CAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEELNSPTSAPSSEKQS 1011

Query: 738  DKAIQSPEGSSSPINASSKLPP 803
              A QSP    SP+   S   P
Sbjct: 1012 PMAQQSPLAQQSPLAQPSPATP 1033


>AF038563-1|AAC05370.1| 1455|Homo sapiens membrane associated
            guanylate kinase 2 protein.
          Length = 1455

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
 Frame = +3

Query: 582  CKFYKWGDELLKTQPHVVANSGHESIIKTISEPKQNDSLDII--------VSAGTNEKPK 737
            C   K GD +L      + N  H  I+K I +   + +L II         SA ++EK  
Sbjct: 966  CAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEELNSPTSAPSSEKQS 1025

Query: 738  DKAIQSPEGSSSPINASSKLPP 803
              A QSP    SP+   S   P
Sbjct: 1026 PMAQQSPLAQQSPLAQPSPATP 1047


>AC004808-1|AAC23438.1|  434|Homo sapiens unknown protein.
          Length = 434

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
 Frame = +3

Query: 582 CKFYKWGDELLKTQPHVVANSGHESIIKTISEPKQNDSLDII--------VSAGTNEKPK 737
           C   K GD +L      + N  H  I+K I +   + +L II         SA ++EK  
Sbjct: 165 CAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEELNSPTSAPSSEKQS 224

Query: 738 DKAIQSPEGSSSPINASSKLPP 803
             A QSP    SP+   S   P
Sbjct: 225 PMAQQSPLAQQSPLAQPSPATP 246


>AB014605-1|BAA31680.2| 1483|Homo sapiens KIAA0705 protein protein.
          Length = 1483

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
 Frame = +3

Query: 582  CKFYKWGDELLKTQPHVVANSGHESIIKTISEPKQNDSLDII--------VSAGTNEKPK 737
            C   K GD +L      + N  H  I+K I +   + +L II         SA ++EK  
Sbjct: 994  CAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEELNSPTSAPSSEKQS 1053

Query: 738  DKAIQSPEGSSSPINASSKLPP 803
              A QSP    SP+   S   P
Sbjct: 1054 PMAQQSPLAQQSPLAQPSPATP 1075


>BX537956-1|CAD97923.1|  665|Homo sapiens hypothetical protein
           protein.
          Length = 665

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 168 LLINSCYRSLGVPSTPKPVSALLKELSDRC--ENQFLNKQIKSAIDQCPQDP--RKEFKC 335
           LL+N C RS G     K    +LK LSD    EN  +   +  A+      P  R+E + 
Sbjct: 482 LLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARA 541

Query: 336 LLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNV 449
           +   D+        N   I   E  + ++N E+  D V
Sbjct: 542 MGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGV 579


>BC065271-1|AAH65271.1|  665|Homo sapiens armadillo repeat
           containing 9 protein.
          Length = 665

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 168 LLINSCYRSLGVPSTPKPVSALLKELSDRC--ENQFLNKQIKSAIDQCPQDP--RKEFKC 335
           LL+N C RS G     K    +LK LSD    EN  +   +  A+      P  R+E + 
Sbjct: 482 LLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARA 541

Query: 336 LLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNV 449
           +   D+        N   I   E  + ++N E+  D V
Sbjct: 542 MGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGV 579


>BC004514-1|AAH04514.2|  537|Homo sapiens ARMC9 protein protein.
          Length = 537

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 168 LLINSCYRSLGVPSTPKPVSALLKELSDRC--ENQFLNKQIKSAIDQCPQDP--RKEFKC 335
           LL+N C RS G     K    +LK LSD    EN  +   +  A+      P  R+E + 
Sbjct: 354 LLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARA 413

Query: 336 LLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNV 449
           +   D+        N   I   E  + ++N E+  D V
Sbjct: 414 MGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGV 451


>AY929062-1|AAX22760.1|  665|Homo sapiens melanoma/melanocyte
           specific protein KU-MEL-1 protein.
          Length = 665

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 168 LLINSCYRSLGVPSTPKPVSALLKELSDRC--ENQFLNKQIKSAIDQCPQDP--RKEFKC 335
           LL+N C RS G     K    +LK LSD    EN  +   +  A+      P  R+E + 
Sbjct: 482 LLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARA 541

Query: 336 LLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNV 449
           +   D+        N   I   E  + ++N E+  D V
Sbjct: 542 MGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGV 579


>AY219922-1|AAO63554.1|  665|Homo sapiens ARM protein protein.
          Length = 665

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 168 LLINSCYRSLGVPSTPKPVSALLKELSDRC--ENQFLNKQIKSAIDQCPQDP--RKEFKC 335
           LL+N C RS G     K    +LK LSD    EN  +   +  A+      P  R+E + 
Sbjct: 482 LLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARA 541

Query: 336 LLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNV 449
           +   D+        N   I   E  + ++N E+  D V
Sbjct: 542 MGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGV 579


>AK022646-1|BAB14153.1|  508|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12584 fis, clone NT2RM4001187. ).
          Length = 508

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 168 LLINSCYRSLGVPSTPKPVSALLKELSDRC--ENQFLNKQIKSAIDQCPQDP--RKEFKC 335
           LL+N C RS G     K    +LK LSD    EN  +   +  A+      P  R+E + 
Sbjct: 325 LLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARA 384

Query: 336 LLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNV 449
           +   D+        N   I   E  + ++N E+  D V
Sbjct: 385 MGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGV 422


>AB058771-1|BAB47497.1|  463|Homo sapiens KIAA1868 protein protein.
          Length = 463

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 168 LLINSCYRSLGVPSTPKPVSALLKELSDRC--ENQFLNKQIKSAIDQCPQDP--RKEFKC 335
           LL+N C RS G     K    +LK LSD    EN  +   +  A+      P  R+E + 
Sbjct: 127 LLMNLCLRSTGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARA 186

Query: 336 LLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNV 449
           +   D+        N   I   E  + ++N E+  D V
Sbjct: 187 MGMEDILRCFIKEGNAEMIRQIEFIIKQLNSEELPDGV 224


>BC024159-1|AAH24159.2|  858|Homo sapiens leucine rich repeat
           containing 8 family, member D protein.
          Length = 858

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 696 LDIIVSAGTNEKPKDKAIQSPEGSSSPINASSKLPPVNEQETLK----QAKSNQDQE 854
           L + + AGT +  KD+ +  P    SP+N+ +  PP N + T      +A +NQDQ+
Sbjct: 36  LMVAIFAGTMQLTKDQVVCLPV-LPSPVNSKAHTPPGNAEVTTNIPKMEAATNQDQD 91


>AL391497-3|CAH72226.1|  858|Homo sapiens leucine rich repeat
           containing 8 family, member D protein.
          Length = 858

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 696 LDIIVSAGTNEKPKDKAIQSPEGSSSPINASSKLPPVNEQETLK----QAKSNQDQE 854
           L + + AGT +  KD+ +  P    SP+N+ +  PP N + T      +A +NQDQ+
Sbjct: 36  LMVAIFAGTMQLTKDQVVCLPV-LPSPVNSKAHTPPGNAEVTTNIPKMEAATNQDQD 91


>AL391497-2|CAH72225.1|  313|Homo sapiens leucine rich repeat
           containing 8 family, member D protein.
          Length = 313

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 696 LDIIVSAGTNEKPKDKAIQSPEGSSSPINASSKLPPVNEQETLK----QAKSNQDQE 854
           L + + AGT +  KD+ +  P    SP+N+ +  PP N + T      +A +NQDQ+
Sbjct: 36  LMVAIFAGTMQLTKDQVVCLPV-LPSPVNSKAHTPPGNAEVTTNIPKMEAATNQDQD 91


>AL391497-1|CAH72224.1|  117|Homo sapiens leucine rich repeat
           containing 8 family, member D protein.
          Length = 117

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 696 LDIIVSAGTNEKPKDKAIQSPEGSSSPINASSKLPPVNEQETLK----QAKSNQDQE 854
           L + + AGT +  KD+ +  P    SP+N+ +  PP N + T      +A +NQDQ+
Sbjct: 36  LMVAIFAGTMQLTKDQVVCLPV-LPSPVNSKAHTPPGNAEVTTNIPKMEAATNQDQD 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,361,756
Number of Sequences: 237096
Number of extensions: 2911071
Number of successful extensions: 9800
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9780
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18715718200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -