Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I10
         (1299 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral signa...    31   2.3  
Z80216-3|CAB02280.1|  373|Caenorhabditis elegans Hypothetical pr...    30   4.1  
Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical pr...    30   4.1  
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr...    30   4.1  
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr...    30   4.1  
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical ...    29   7.2  
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr...    29   9.5  
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr...    29   9.5  
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.        29   9.5  
AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical ...    29   9.5  

>AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral
           signaling target protein 2 protein.
          Length = 661

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +3

Query: 639 NSGHESIIKTISEPKQNDSLDIIVSAGTNEKPKDKAIQSPEGSSSPINASSKLPPVNEQE 818
           +SG E  +  I   + +D      + GTN    ++  +SPE    P N   +    +E +
Sbjct: 359 HSGSEENVSQIENEEGDDE-----AIGTNSNSSNEVTESPETIEEPDNVDMEESSESEVD 413

Query: 819 T-LKQAKSNQDQELKSDV 869
           T + + ++  D E+  DV
Sbjct: 414 THIDETRNESDDEITDDV 431


>Z80216-3|CAB02280.1|  373|Caenorhabditis elegans Hypothetical
           protein F10G8.3 protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 79  FEIACTSIFVXKTSGNLKGFPIGSI 5
           F+I C SIF  K++ N  GF +GSI
Sbjct: 219 FQIRCISIFKDKSNQNPAGFALGSI 243


>Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical
           protein T04B2.4 protein.
          Length = 344

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 528 CSDVCGVDVWTNLDVNFYCKFYKWG 602
           C    G+D+WT L   F   F KWG
Sbjct: 75  CLSTAGIDIWTLLTNYFGAMFAKWG 99


>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
           protein ZK688.5b protein.
          Length = 1595

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 836 VKSRPGTKK*CTT*IKPNVPQNVIPNASSDKQP 934
           V +RPG +   TT   P+VP   +P   SD+QP
Sbjct: 612 VTARPGRRFVATTGDAPSVPVETLPPPGSDQQP 644


>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
           protein ZK688.5a protein.
          Length = 1620

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 836 VKSRPGTKK*CTT*IKPNVPQNVIPNASSDKQP 934
           V +RPG +   TT   P+VP   +P   SD+QP
Sbjct: 612 VTARPGRRFVATTGDAPSVPVETLPPPGSDQQP 644


>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
           protein F57C7.1b protein.
          Length = 1087

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/46 (26%), Positives = 27/46 (58%)
 Frame = +3

Query: 750 QSPEGSSSPINASSKLPPVNEQETLKQAKSNQDQELKSDVLPELNP 887
           Q P+GS++P +  S   PV +++ +K  +  ++  + S+ +P+  P
Sbjct: 155 QKPQGSTTPCSVQSPASPVGDEQAVKM-EEVEEPIVASEEVPDKKP 199


>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
           protein F57C7.1a protein.
          Length = 1209

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/46 (26%), Positives = 27/46 (58%)
 Frame = +3

Query: 750 QSPEGSSSPINASSKLPPVNEQETLKQAKSNQDQELKSDVLPELNP 887
           Q P+GS++P +  S   PV +++ +K  +  ++  + S+ +P+  P
Sbjct: 155 QKPQGSTTPCSVQSPASPVGDEQAVKM-EEVEEPIVASEEVPDKKP 199


>AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical
           protein F54D12.7 protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = +3

Query: 579 YCKFYKWGDELLKTQPHVVANSGHESI-IKTISEP-KQNDSLDIIVSAGTNEKPKDKAIQ 752
           YC  Y  GD +L      + +SG+ES+  K ++ P K  D  + ++   TNE  K+  I+
Sbjct: 64  YCLLYAVGDIILVRNDQDIFSSGNESVSFKILNSPAKCADRAEDMLLGITNEYNKNN-IE 122

Query: 753 SPEGSSSPINASSKLPPVNEQETLKQAKSN 842
           S E   S I A      +N + T     +N
Sbjct: 123 SYEIQVSEI-AGISYYSINYEYTFTDGCNN 151


>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
            F39B2.4b protein.
          Length = 1589

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +3

Query: 765  SSSPINASSKLPPVNEQETLKQAKSNQDQELKSDVLPELNPMCLRM*YQMHHL 923
            S S   A  + PP  E+   K+ +  Q+Q +K+    E  P    +    HHL
Sbjct: 1376 SQSEPTAEQETPPEKEKSPEKEKEQEQEQHVKAHQPLESTPSVSSLPQMQHHL 1428


>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
            F39B2.4a protein.
          Length = 1587

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +3

Query: 765  SSSPINASSKLPPVNEQETLKQAKSNQDQELKSDVLPELNPMCLRM*YQMHHL 923
            S S   A  + PP  E+   K+ +  Q+Q +K+    E  P    +    HHL
Sbjct: 1374 SQSEPTAEQETPPEKEKSPEKEKEQEQEQHVKAHQPLESTPSVSSLPQMQHHL 1426


>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
          Length = 1587

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +3

Query: 765  SSSPINASSKLPPVNEQETLKQAKSNQDQELKSDVLPELNPMCLRM*YQMHHL 923
            S S   A  + PP  E+   K+ +  Q+Q +K+    E  P    +    HHL
Sbjct: 1374 SQSEPTAEQETPPEKEKSPEKEKEQEQEQHVKAHQPLESTPSVSSLPQMQHHL 1426


>AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical
           protein Y53C10A.4 protein.
          Length = 908

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = +3

Query: 642 SGHESIIKTISEPKQNDSLDIIVSAGTNEKPKDK---AIQSPEGSSSPINASSKLPPVNE 812
           S H   I  ISEP  ND   ++ S+  +E   D+    +  P+ S+S  +  ++   V+ 
Sbjct: 506 SAHLETISEISEPPTNDE-RLVFSSSEDEDDDDEDELRVYRPKSSTSTSSCFARTSFVS- 563

Query: 813 QETLKQAKSNQDQELKSD 866
            ETLK +  + D+ L  +
Sbjct: 564 -ETLKTSADDGDKGLNKE 580


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,342,515
Number of Sequences: 27780
Number of extensions: 479107
Number of successful extensions: 1498
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3621523944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)