Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_I05
(1248 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0038 + 375893-376093,376758-376883,376978-377177,377411-37... 87 3e-17
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 62 1e-09
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 58 1e-08
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 58 2e-08
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 56 6e-08
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 53 4e-07
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 36 0.088
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 34 0.20
09_03_0035 - 11765108-11765376,11765909-11766005,11766505-117665... 32 0.82
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 31 2.5
02_02_0106 + 6814391-6817007,6817086-6817462 30 3.3
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 30 3.3
04_03_0865 + 20402711-20404057 30 4.4
02_02_0109 + 6830802-6833412,6833491-6833861 30 4.4
05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 29 7.6
>06_01_0038 +
375893-376093,376758-376883,376978-377177,377411-377502,
377966-378222,378610-378846,378986-379063,380422-380571,
380646-380720,381109-381205,381289-381341
Length = 521
Score = 87.0 bits (206), Expect = 3e-17
Identities = 47/126 (37%), Positives = 76/126 (60%)
Frame = +2
Query: 413 LSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQK 592
L+ + ++ ++ ACE++ PM + R+L NG+ ++V V KRS EL V + D+
Sbjct: 6 LAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMENRVKVFHKRSDELKVRD--DLDSP 63
Query: 593 ANILVTEVFDTELIGEGALSTFSHAHKFLLEEDAIVVPDSAVIYAQVVECPILQKWNKLN 772
A+ILV+E+ D+EL+GEG + T A+ LL ++ +VP A Y Q+VE L W KL+
Sbjct: 64 ADILVSEILDSELLGEGLIPTLQQAYDMLLAKNPKIVPYRATTYGQLVESTFL--W-KLH 120
Query: 773 DLADED 790
DL + +
Sbjct: 121 DLHNNE 126
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 61.7 bits (143), Expect = 1e-09
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Frame = +2
Query: 290 DMLHDTERNQKYSKALKLAIEKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 469
+ML D R + Y AL L + N A VLD+G GTG+LS+ AAK+GA ++A +
Sbjct: 268 EMLGDKVRTEAYRDAL-LGNPSLMNG---ATVLDVGCGTGILSLFAAKAGASRVIAVDGS 323
Query: 470 QPMAECCLRILECNGVA--DKVTVIPKRSTEL-----TVGENGDMK-----QKANILVTE 613
M + + NG + + + KR T++ T E + K K ++LV+E
Sbjct: 324 AKMVSVATEVAKSNGFLYDENMEMQQKRDTQVITVVHTKAEELNHKIQVPSNKFDVLVSE 383
Query: 614 VFDTELIGEGALSTFSHAHKFLLEEDAIVVPDSAVIY 724
L+ E LS+ +A L+ ++PD+A I+
Sbjct: 384 WMGYCLLYESMLSSVLYARDHFLKPGGAILPDTATIF 420
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 58.0 bits (134), Expect = 1e-08
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +2
Query: 236 MQDEDYDYHQEIARSAFAD-MLHDTERNQKYSKALKLAIEKMHNDGKKANVLDIGTGTGL 412
+ + D Y Q + + M+ D R Y A+ + +GK V+D+G GTG+
Sbjct: 41 LAEHDRIYFQSYSHIGIHEAMIKDRVRTDAYRSAIMH--HQKFIEGKV--VMDVGCGTGI 96
Query: 413 LSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQK 592
LS+ A++GA + A EA + MA I++ N + DKV V+ R E+ +++ K
Sbjct: 97 LSVFCARAGAKCVYAVEASE-MATQAREIVKANNLDDKVVVVHGRV------EDVEVEDK 149
Query: 593 ANILVTEVFDTELIGEGALSTFSHAHKFLLEEDAIVVPDSAVIY 724
+++++E L+ E L + A L+ +++P A ++
Sbjct: 150 VDVIISEWMGYMLLYESMLPSVLFARDKWLKPGGLILPSHATLF 193
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 57.6 bits (133), Expect = 2e-08
Identities = 53/176 (30%), Positives = 85/176 (48%)
Frame = +2
Query: 251 YDYHQEIARSAFADMLHDTERNQKYSKALKLAIEKMHNDGKKANVLDIGTGTGLLSIMAA 430
Y YHQ+ +ML D R Y A+ H+ K VLD+GTG+G+L+I +A
Sbjct: 38 YLYHQK-------EMLCDRVRMDAYHSAV---FRNAHHFRGKV-VLDVGTGSGILAIWSA 86
Query: 431 KSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQKANILVT 610
++GA + A EA MAE + N VAD V VI + S E V + +K +++++
Sbjct: 87 QAGARKVYAVEATN-MAEHARELARANDVADIVEVI-QGSMEDVV-----LPEKVDVIIS 139
Query: 611 EVFDTELIGEGALSTFSHAHKFLLEEDAIVVPDSAVIYAQVVECPILQKWNKLNDL 778
E L+ E + A L+ D ++ P A ++ + + + NK+ DL
Sbjct: 140 EWMGYFLLRESMFDSVICARDRWLKPDGVMYPSHARMWLAPIRSDLAE--NKMEDL 193
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 56.0 bits (129), Expect = 6e-08
Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Frame = +2
Query: 284 FADMLHDTERNQKYSKA--LKLAIEKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVA 457
+ +LH Q + + A+ + +D + V+D+G G+G+LS+ AA++GA + A
Sbjct: 175 YGQLLHQQNMLQDFVRTGTYYAAVMENRSDFEGRVVVDVGAGSGILSLFAAQAGARHVYA 234
Query: 458 CEAFQPMAECCLRILECN-GVADKVTVIPKRSTELTVGENGDMKQKANILVTEVFDTELI 634
EA + MAE R++ N + ++TVI + E+ ++ +KA+IL++E T L+
Sbjct: 235 VEASE-MAEHAQRLISGNPSLGQRITVIKGKVEEV------ELPEKADILISEPMGTLLV 287
Query: 635 GEGALSTFSHAHKFLLEEDAIVVPDSAVIY 724
E L ++ A L + P + I+
Sbjct: 288 NERMLESYVIARDRFLVPGGKMFPTTGRIH 317
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 53.2 bits (122), Expect = 4e-07
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Frame = +2
Query: 383 VLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRST--E 556
VLD+G GTG+LSI A +GA + A +A +A + I+ N ++DKV V+ R
Sbjct: 85 VLDVGCGTGVLSIFCAFAGAARVYAVDA-SDIALQAMEIVRENELSDKVIVLHGRIEYYY 143
Query: 557 LTVGENGD--MKQKANILVTEVFDTELIGEGALSTFSHAHKFLLEEDAIVVPDSAVIY 724
+ + EN D +++K +++++E L+ E L + A L+ +++P A +Y
Sbjct: 144 IRIFENQDVEIEEKVDVIISEWMGYMLLYESMLGSVIFARDKWLKPGGLILPSHASLY 201
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 35.5 bits (78), Expect = 0.088
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 118 KKCDFIYSIHIFTRRSLNVFLINSGKLWE 32
K CDF +++ RRS +++IN GK WE
Sbjct: 32 KNCDFQMERYVYKRRSDGIYIINLGKTWE 60
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 34.3 bits (75), Expect = 0.20
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 118 KKCDFIYSIHIFTRRSLNVFLINSGKLWE 32
K CDF +++ RR+ +++IN GK WE
Sbjct: 32 KNCDFQMERYVYKRRTDGIYIINLGKTWE 60
>09_03_0035 -
11765108-11765376,11765909-11766005,11766505-11766579,
11767367-11767650,11768466-11768562
Length = 273
Score = 32.3 bits (70), Expect = 0.82
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = +1
Query: 367 WKESQCLGYWHRYRA---PLHNG 426
W + C+G WH+YRA LHNG
Sbjct: 110 WHKDDCVGEWHKYRACLEKLHNG 132
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = +2
Query: 323 YSKALKLAIEKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLR-- 496
+S+A + H D K GT ++ A K G+ T+ A A+ CL+
Sbjct: 211 FSQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGK-GSATLSMAYAGAVFADACLKGL 269
Query: 497 -----ILECNGVADKVTVIPKRSTELTVGENG 577
++EC+ V VT +P ++++ +G+NG
Sbjct: 270 NGVPDVVECSFVQSTVTELPFFASKVRLGKNG 301
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 137 SHKRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDM 238
S+ RF + + KMKVF N L+G WD+
Sbjct: 466 SNNRFSGPIPTLAGKMKVFRAANNLLSGEIPWDL 499
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 359 HNDGKKANVLDIGTGTGLLSIMAAKSG 439
+ D + +VLDIGTG+G LS AK G
Sbjct: 167 NKDLRSCSVLDIGTGSGRLSQQLAKQG 193
>04_03_0865 + 20402711-20404057
Length = 448
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 690 SSSNRNLCA*ENVDRAPSPINSVSNTSVTRM 598
+SSN N NVDR P NS+ N+ ++RM
Sbjct: 188 NSSNINKTGDVNVDRVLRPYNSIDNSKLSRM 218
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 83 KYMNTIYKVTFFNYL-LASSHKRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDM 238
++ T K +N+ L S+ +F + + KMKVF N L+G WD+
Sbjct: 447 RFSGTFPKQLPWNFTRLDISNNKFSGPIPTLAGKMKVFIAANNLLSGEIPWDL 499
>05_05_0352 +
24328117-24328303,24328451-24328559,24330634-24330692,
24331139-24331220,24331361-24331481,24331751-24332278,
24332724-24332831,24332934-24333131,24334043-24334234,
24336116-24336199,24336385-24336525,24336683-24336748,
24336880-24337047,24337134-24337463,24337568-24337666
Length = 823
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 386 LDIGTGTGLLSIMAAKSGA 442
LD GTGTG+L I A K GA
Sbjct: 666 LDYGTGTGVLGIAALKMGA 684
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,257,816
Number of Sequences: 37544
Number of extensions: 539143
Number of successful extensions: 1372
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3852724812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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