Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_I02
(1224 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical p... 30 2.9
U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical p... 29 5.1
U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical p... 29 5.1
Z70286-7|CAA94292.3| 431|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical pr... 29 8.8
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 29 8.8
>U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical
protein K06C4.8 protein.
Length = 355
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 597 FQI*HHIYNVLISYFS-FCFLIVHIYQCRYCISYSVCIT 484
F+I HHI NVL+ ++S F I I+ +Y S C+T
Sbjct: 281 FKIIHHISNVLLVFYSASTFFIYLIFSEKYRNVLSTCVT 319
>U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical
protein T22F3.11b protein.
Length = 375
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 367 GRLIRYAIAGVCNLCLDPLNADYILTHLGLKPLFRLLKSSDTDTVADTITTL--IYMYNE 540
G R+ I GV LCL + +++I+ + F +K+ +D V D+ TL IY YN
Sbjct: 6 GNYYRWIIVGVGFLCLTSICSNFIVINF----TFICMKNDMSDAVTDSNGTLRSIYDYNG 61
Query: 541 KTK 549
K
Sbjct: 62 SEK 64
>U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical
protein T22F3.11a protein.
Length = 453
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 367 GRLIRYAIAGVCNLCLDPLNADYILTHLGLKPLFRLLKSSDTDTVADTITTL--IYMYNE 540
G R+ I GV LCL + +++I+ + F +K+ +D V D+ TL IY YN
Sbjct: 6 GNYYRWIIVGVGFLCLTSICSNFIVINF----TFICMKNDMSDAVTDSNGTLRSIYDYNG 61
Query: 541 KTK 549
K
Sbjct: 62 SEK 64
>Z70286-7|CAA94292.3| 431|Caenorhabditis elegans Hypothetical
protein K08C7.1 protein.
Length = 431
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 765 NLAYF--LIIFIVHNNIGESIREHLVHYEVRLCNYSGGLTHI 646
NLA+F L++F+ + G ++ + VR+ YSGGL H+
Sbjct: 238 NLAFFSSLLVFLQY---GPLYMNKVLGFSVRVTGYSGGLAHV 276
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 454 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMSNLKTTQDLRIVNLAT 633
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 864 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 923
Query: 634 VFLQNVCK 657
+ L + K
Sbjct: 924 IHLYDFVK 931
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 454 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMSNLKTTQDLRIVNLAT 633
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 1049
Query: 634 VFLQNVCK 657
+ L + K
Sbjct: 1050 IHLYDFVK 1057
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 454 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMSNLKTTQDLRIVNLAT 633
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 864 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 923
Query: 634 VFLQNVCK 657
+ L + K
Sbjct: 924 IHLYDFVK 931
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 454 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMSNLKTTQDLRIVNLAT 633
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 1049
Query: 634 VFLQNVCK 657
+ L + K
Sbjct: 1050 IHLYDFVK 1057
>Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical
protein C48B4.8 protein.
Length = 196
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 585 HHIYNVLISYFSFCFLIVHIYQCRYCISYSVCIT 484
H IY +L FSF F+ Y + C + ++C T
Sbjct: 86 HFIYCLLYIVFSFLFIPTFYYDQKICTNAAICKT 119
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 361 FHSSAHTRIYLVLQRL*CMSSSQDHMQNLPNWLKLATLL 245
F R+Y L RL M++ Q L NWL+L + L
Sbjct: 243 FSDEVSDRVYSELHRLKSMNAQQSEYNILMNWLELVSSL 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,163,221
Number of Sequences: 27780
Number of extensions: 440050
Number of successful extensions: 956
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3380764392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -