Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I02
         (1224 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    26   0.77 
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    26   0.77 
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    26   0.77 
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    26   0.77 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    26   0.77 
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    26   0.77 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   4.1  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   4.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   7.2  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   9.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   9.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   9.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   9.5  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 703 LSNRFPYIIVNNKNYQKIC 759
           LSN + Y   NN NY+++C
Sbjct: 85  LSNNYNYSNYNNNNYKQLC 103


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 703 LSNRFPYIIVNNKNYQKIC 759
           LSN + Y   NN NY+++C
Sbjct: 85  LSNNYNYSNYNNNNYKQLC 103


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 703 LSNRFPYIIVNNKNYQKIC 759
           LSN + Y   NN NY+++C
Sbjct: 85  LSNNYNYSNYNNNNYKQLC 103


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 703 LSNRFPYIIVNNKNYQKIC 759
           LSN + Y   NN NY+++C
Sbjct: 85  LSNNYNYSNYNNNNYKQLC 103


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 703 LSNRFPYIIVNNKNYQKIC 759
           LSN + Y   NN NY+++C
Sbjct: 85  LSNNYNYSNYNNNNYKQLC 103


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 703 LSNRFPYIIVNNKNYQKIC 759
           LSN + Y   NN NY+++C
Sbjct: 85  LSNNYNYSNYNNNNYKQLC 103


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 422 SGSKHKLQTPAMAYLINLPIVSFFSTYKNISS 327
           + S   +Q   +  L  +P+VSFFST   +S+
Sbjct: 219 ASSVTSIQVANLLRLFRIPLVSFFSTSPELSN 250


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 886 GDNYDPQSNLKMHPNLSVLMFF 821
           G NYD +SN+ M+ + +V+  F
Sbjct: 60  GRNYDMESNMDMYKDKNVVQKF 81


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 886 GDNYDPQSNLKMHPNLSVLMFF 821
           G NYD +SN+ M+ + +V+  F
Sbjct: 60  GRNYDMESNMDMYKDKNVVQKF 81


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 404 LQTPAMAYLINLPIVSFFSTYK 339
           L+TP+  +++NL I  FF   K
Sbjct: 79  LRTPSNMFVVNLAICDFFMMIK 100


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 597 NYAGFEDRQFSYSFSTKCV*DHLNSYINELH 689
           N++ FEDR   Y +        L   INE H
Sbjct: 29  NFSNFEDRVTMYVYEEIINGKKLTEIINETH 59


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 148 FKSKNFNGNCESSYVN 101
           + + N+N NC+  Y N
Sbjct: 100 YNNNNYNNNCKKLYYN 115


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 148 FKSKNFNGNCESSYVN 101
           + + N+N NC+  Y N
Sbjct: 100 YNNNNYNNNCKKLYYN 115


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 148 FKSKNFNGNCESSYVN 101
           + + N+N NC+  Y N
Sbjct: 100 YNNNNYNNNCKKLYYN 115


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 148 FKSKNFNGNCESSYVN 101
           + + N+N NC+  Y N
Sbjct: 100 YNNNNYNNNCKKLYYN 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,132
Number of Sequences: 438
Number of extensions: 5819
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41661861
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)