Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I01
         (1237 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    75   2e-13
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    25   3.0  
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300...    25   3.6  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    25   3.6  
10_06_0180 + 11526139-11526172,11526365-11527218                       25   4.1  
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452...    30   4.3  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 74.5 bits (175), Expect = 2e-13
 Identities = 43/111 (38%), Positives = 55/111 (49%)
 Frame = +3

Query: 123 VSKAEXACVXSALILVDXXVAVTGXXISTILKAAAVXVAPYWPGLFAKALEGINVRDLIT 302
           +S +E AC  +ALIL D  + +T   I+T++KAA + V  YWPGLFAK LE  +V DLI 
Sbjct: 1   MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60

Query: 303 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 455
           ++GSG                                   SDDDMGF LFD
Sbjct: 61  SVGSG-GGAAPVAAAAAPAAGGGAAAAPAAEEKKEEAKEESDDDMGFSLFD 110


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 24.6 bits (51), Expect(2) = 3.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 834 PPPPPPXPXXXN 799
           PPPPPP P   N
Sbjct: 230 PPPPPPPPKPAN 241



 Score = 24.2 bits (50), Expect(2) = 3.0
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 867 PGVXRXIXXXKPPPPPPXP 811
           PG         PPPPPP P
Sbjct: 193 PGTEEAGPSTLPPPPPPPP 211


>05_01_0384 +
           2997465-2999777,2999960-3000035,3003027-3003102,
           3003571-3004442,3004592-3004773,3005206-3005295,
           3005388-3005675,3005776-3005997,3006053-3006133,
           3006634-3006861
          Length = 1475

 Score = 24.6 bits (51), Expect(2) = 3.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 834 PPPPPPXPXXXN 799
           PPPPPP P   N
Sbjct: 583 PPPPPPPPAAGN 594



 Score = 23.8 bits (49), Expect(2) = 3.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 837 KPPPPPPXP 811
           +PPPPPP P
Sbjct: 578 QPPPPPPPP 586


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 25.0 bits (52), Expect(2) = 3.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 867 PGVXRXIXXXKPPPPPP 817
           PG+        PPPPPP
Sbjct: 656 PGIGNKFPAPPPPPPPP 672



 Score = 23.4 bits (48), Expect(2) = 3.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 834 PPPPPPXP 811
           PPPPPP P
Sbjct: 712 PPPPPPPP 719


>10_06_0180 + 11526139-11526172,11526365-11527218
          Length = 295

 Score = 24.6 bits (51), Expect(2) = 4.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 834 PPPPPPXPXXXN 799
           PPPPPP P   N
Sbjct: 170 PPPPPPPPLAYN 181



 Score = 23.8 bits (49), Expect(2) = 4.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 837 KPPPPPPXP 811
           +PPPPPP P
Sbjct: 168 QPPPPPPPP 176


>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
            4521632-4521723,4522226-4522342,4522641-4522704,
            4523175-4523228,4523579-4523666,4523788-4524023,
            4525258-4525478,4525634-4525827,4525938-4525995,
            4526771-4526824,4526851-4527473,4527580-4527640,
            4528417-4528590,4528803-4529063,4529201-4529320,
            4529388-4530022,4530062-4530828,4530915-4531012,
            4531101-4531155,4531230-4531318
          Length = 2010

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = -1

Query: 310  PMLVIRSRTLMPSKALANRPGQYGATXTAAAFKMVEIXXPVTATXXSTRMRAEXTHANSA 131
            P LV+RS  +MP    A+   + GAT +      V +   VTA        AE  H    
Sbjct: 1141 PTLVLRSTAMMP----ASSAPRVGATGSGTRVNPVPLRVMVTACTSGVAGDAEGIHVGGK 1196

Query: 130  FDTILSFERASCRRPE 83
             +  L  E A  R  E
Sbjct: 1197 REMELWMETAEAREVE 1212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,341,274
Number of Sequences: 37544
Number of extensions: 275796
Number of successful extensions: 6648
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5688
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)