Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H23
(1200 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 78 1e-14
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 33 0.40
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 30 2.8
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 30 3.7
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 29 4.9
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 29 4.9
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 4.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 4.9
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 6.5
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 77.8 bits (183), Expect = 1e-14
Identities = 53/140 (37%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Frame = +1
Query: 163 LPKVATDLKXQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLK 339
LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS++L
Sbjct: 7 LPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLH 63
Query: 340 HTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXX 519
T +EK LP D + EK H L D + +F +K T T EKN L
Sbjct: 64 STPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL----PSPTDVAR 119
Query: 520 NKFLNGIENFDPTKLKHTET 579
K L +FD + L H ET
Sbjct: 120 EKTLQMAASFDKSALHHVET 139
Score = 71.7 bits (168), Expect = 9e-13
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = +1
Query: 331 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXX 510
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK L
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 511 XXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 630
+ + I NF LK TET EKN LP+ + +EK+
Sbjct: 83 KQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +1
Query: 382 VVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTK 561
V K +Q L V + ++K T EKN L + ++ IE+FD TK
Sbjct: 4 VTELPKMNQELAGAVR--EGLELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTK 61
Query: 562 LKHTETCEKNPLPTKDVIEQEK 627
L T EK LP+ D I+QEK
Sbjct: 62 LHSTPVKEKIVLPSADDIKQEK 83
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 33.5 bits (73), Expect = 0.30
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 97 VIKNLLIQHGLLRVVXLPPXKALPKVATDLKXQLEGFNTSCLRDVDTNEKIVLPSAEDVA 276
+I+N L LLR+V + A K A D+ E F T L +VD ++ +D++
Sbjct: 104 LIENHLHSRSLLRIVFVVDSAAFSKNARDVA---ELFYTVALENVDKVPILIACHKQDLS 160
Query: 277 TEKTQKSLFDGIEK 318
KT+K + + +EK
Sbjct: 161 LAKTEKVIRNSLEK 174
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 33.1 bits (72), Expect = 0.40
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 536
+ P +RR + E + RSR R+ HD RK + + RS RS K ++
Sbjct: 7 KSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRNRSRSRS-RSRSPKRSRRDK 65
Query: 537 HRELRSH*AEAHGDVR--KEPAPHKGRH-*AREI 629
E + E G++R PAP K R ARE+
Sbjct: 66 KEEKQEQ-EEEDGEIRDTTPPAPEKPRQLTAREL 98
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 30.7 bits (66), Expect = 2.1
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 327 EPAEAH-RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSY- 500
+P E R E Q+R GE P + R + D+ D+ +E P R +
Sbjct: 141 DPTEVKDRFDKEREGRKQQRGDDGEEEDHPKSQRGIQRSNEDDRKDE--EEEERPRRPHQ 198
Query: 501 RSGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH 614
R G+ E E ++ R HG+ +EP+ + H
Sbjct: 199 RRGDSYEDEEEDRKKYRPR----HGEEEEEPSREREHH 232
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 345 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDS--DEAHDDGRKESTAPDRSYRSGEGK 518
+D + +R+ + S + GR RT ++ + D R +P+RS RS E +
Sbjct: 233 KDKNRKKEKTERKRKRSHSSSDRRGR-RTSKESRRRSRSRDTHRTRRRSPERSRRSTETR 291
Query: 519 EQIPERHRELRS 554
+ PER RS
Sbjct: 292 NERPERPSRWRS 303
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/94 (27%), Positives = 38/94 (40%)
Frame = +3
Query: 324 FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 503
+ P+ RDS + G RR RS + RSR +D D + D E +A R
Sbjct: 329 YVPSRKSRDSRDAGRRGSRRDRSRD-------RSRDRDRDRDRDNRDRYFEKSANSRREE 381
Query: 504 SGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHK 605
+EQ ER R + E + +E A +
Sbjct: 382 EQNRREQQRERERAEQERRREREKEREQEKAKER 415
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +3
Query: 330 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPD--RSYR 503
P + E PA RR R S + + T DS + DD S++ D S
Sbjct: 58 PRSSELPISESPAPRARRARKQRSKRKSVKPPNTSSDDSSDDSDDSSSSSSSDDSVSSKS 117
Query: 504 SGEGKEQIPERHRELRSH*AEAHG 575
S + P R R+ + + HG
Sbjct: 118 STNSSDSSPCRCRDGLAEWEQRHG 141
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 507 GEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH*AREISLNHY 644
G+ + Q P+ + RS + GD+ P P A EI L+HY
Sbjct: 320 GQNQPQQPQYQQHPRSQSVDPSGDMNGGPRPIHQNFSASEIELHHY 365
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 728 ITSFIFVFVQWQPCLGNGDVQQPRILFKS*R*VTPYANKQXVDAINRSNTDN 883
ITSFI F++ + C+ ++ R+LF + P+ N + ++ I S TDN
Sbjct: 131 ITSFIN-FLKAKDCIHVKEIHFNRLLFDDILSILPFFNAKVLENIKLSETDN 181
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 336 EAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKE 476
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 391 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 266
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 391 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 266
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,320,525
Number of Sequences: 27780
Number of extensions: 406003
Number of successful extensions: 1418
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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