Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H22
         (1223 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1636 + 34951841-34954322,34954440-34954627,34955737-349558...    32   0.80 
12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741     30   3.2  
07_01_0498 + 3734498-3734976,3736176-3736800                           30   4.3  
01_01_0839 - 6540971-6541978,6542076-6542240,6542330-6542419,654...    29   5.6  
07_03_1153 + 24398122-24398747,24399326-24399542,24399741-244002...    29   7.4  
03_02_0915 + 12360079-12360095,12360225-12361353                       29   7.4  
01_03_0256 + 14288885-14288936,14289362-14291335,14291648-142916...    29   7.4  
07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305           29   9.8  

>04_04_1636 +
           34951841-34954322,34954440-34954627,34955737-34955838,
           34956101-34956177,34956258-34956319,34956504-34956511
          Length = 972

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -2

Query: 886 PXLIRIYXLRVXR-VPFAXXDLQ-FLGGGNVVSGREHHVRMDQRASPYVNVQLLSFGLV- 716
           P ++R+Y     + + +A  +   FLGGG VV GR   +R ++ AS Y  V+ + +  V 
Sbjct: 222 PKIVRMYSAASQQPMDYALKETSPFLGGGQVVGGRV--IRAEKHASTYDLVERMQYLFVR 279

Query: 715 VIDWFNLEDGDHPGEL 668
           V+   +L D D  G L
Sbjct: 280 VVKARDLPDMDVTGSL 295


>12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741
          Length = 118

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 752 GGGSLIHPNVVLTAAHYVAAAKELKIXAGEWDTXNTKXIYPYQXRTV 892
           G  S++HPNV +T   + A           WDT  TK + PY  R +
Sbjct: 67  GYSSMMHPNVEITRTGFRAVTTCRLPLTNPWDTQQTKEL-PYLSRVL 112


>07_01_0498 + 3734498-3734976,3736176-3736800
          Length = 367

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 469 DVCSVSDYGVIGRVAQVIVDALPFLAVGGLARKV 368
           D    +D GV+  +A  +VD   FLA GG+ R V
Sbjct: 26  DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59


>01_01_0839 -
           6540971-6541978,6542076-6542240,6542330-6542419,
           6542536-6542736,6542886-6543098,6543216-6543461
          Length = 640

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = -2

Query: 733 LSFGLVVIDWFNLEDGDHPGELSELGLAVHVARGPEGNAVRVPPAAALVHWQGLRPGRDG 554
           ++F + ++ W  LE G       ELG A+   R      V+  PA  +++ +      D 
Sbjct: 102 MAFTVTMMAWSVLEYGKQMAAAGELGHAMDAVRWGADYFVKAHPAPNVLYGEVGDGDSDH 161

Query: 553 ICWR 542
           +CW+
Sbjct: 162 VCWQ 165


>07_03_1153 +
           24398122-24398747,24399326-24399542,24399741-24400220,
           24400801-24401007,24401112-24401249,24401317-24401538
          Length = 629

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 527 APDQRPPTD--PITPRPETLPMNQGCGWRNPDGVA 625
           A D  P TD  P+ P+P T     G  WRNP   A
Sbjct: 43  AADAAPATDAAPLPPKPSTGSPFYGENWRNPAAAA 77


>03_02_0915 + 12360079-12360095,12360225-12361353
          Length = 381

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 542 PPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETK 661
           PP + I       PM+QG G  + D  A  T  +VD E K
Sbjct: 42  PPAETIVELTTKKPMSQGGGGSSSDSGATSTGAEVDDEEK 81


>01_03_0256 + 14288885-14288936,14289362-14291335,14291648-14291673,
            14291855-14292025,14292560-14292647,14292711-14292802,
            14292920-14293384,14293860-14294633,14294890-14295087,
            14296940-14297374,14297455-14297688,14298042-14298323
          Length = 1596

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 644  VDGETKFGEFPWMVAILKVEPVDDNEP 724
            +DGE    EFP+   +  VE  DD+EP
Sbjct: 1197 LDGEESLAEFPYASFLQTVETSDDSEP 1223


>07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305
          Length = 611

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 224 NMDTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVP 349
           N++  D  +  + + TS++ P  L+P+  P+V   AP    P
Sbjct: 17  NVEASDDHAAFDAMATSSRRPPSLRPLRHPNVTSLAPVIFPP 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,103,768
Number of Sequences: 37544
Number of extensions: 594856
Number of successful extensions: 1797
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1796
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3759607596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)