Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H22
         (1223 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical pr...    31   1.7  
Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical p...    31   2.2  
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    30   2.9  
U23170-2|ABD63218.1|  150|Caenorhabditis elegans Hypothetical pr...    30   2.9  
AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical...    29   5.1  
AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z31590-2|CAD27604.1|  538|Caenorhabditis elegans Hypothetical pr...    24   5.8  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    29   6.7  

>Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical
           protein W07G4.3 protein.
          Length = 820

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 342 WCLASLRTMTFRARPPT-AKKGSASTITCATRPITP*SLTEQTSS 473
           W L SL    ++  PP   K G+ +T   ++RP+TP    E+  S
Sbjct: 535 WALKSLSGKFYKGPPPAEVKPGAPATADTSSRPVTPNPTAEKEKS 579


>Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical
           protein Y57G11C.5 protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 625 GNAVRVPPAAALVHWQGLRPGRDGI 551
           G + + PP A+L HW  LR G +GI
Sbjct: 304 GQSQKAPPMASLWHWAHLRVGSEGI 328


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 14/18 (77%), Positives = 14/18 (77%)
 Frame = +2

Query: 755 GGSLIHPNVVLTAAHYVA 808
           GGSLI PN VLTAAH  A
Sbjct: 85  GGSLIDPNFVLTAAHCFA 102


>U23170-2|ABD63218.1|  150|Caenorhabditis elegans Hypothetical
           protein F58F12.4 protein.
          Length = 150

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
 Frame = +2

Query: 230 DTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGEC 409
           ++ DL + IN+   S    +Q++  TQ   +   PST +P      DL C + +     C
Sbjct: 26  ESSDLANFINET-DSEMTSSQIESSTQIPSSTMNPSTKLPSSMRGKDLHCPSIENAVSSC 84

Query: 410 ------VNYYLCNAAN 439
                 V Y  C  AN
Sbjct: 85  PKDSKWVYYTCCGGAN 100


>AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical
           protein Y73F8A.20 protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 625 GNAVRVPPAAALVHWQGLRPGRDGI 551
           G + + PP A+L HW  L+ G  GI
Sbjct: 329 GQSQKAPPMASLWHWASLKVGSSGI 353


>AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical
           protein F54A3.1 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +3

Query: 378 ARPPTAKKGSASTITCATRPITP*SLTEQTSSI*ESAVARVHRTSTSAVWLPTRDRQQIP 557
           ARP T+  G A+     +R   P + +   +    SA + V R  T A  + +  R + P
Sbjct: 355 ARPQTSS-GIAAPGAPRSRIAMPTTSSSSLARRPGSASSSVPRVPTGAASMTSSSRIRPP 413

Query: 558 SRPGRRP 578
           SRPG RP
Sbjct: 414 SRPGSRP 420


>Z31590-2|CAD27604.1|  538|Caenorhabditis elegans Hypothetical
           protein R01H10.3b protein.
          Length = 538

 Score = 24.2 bits (50), Expect(2) = 5.8
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +2

Query: 446 IITDGTNVIDIRVG--SGPCSSYIDVCCLAPDQRPPTDPITPRPETLPMN 589
           ++ D   ++ +R    S P SS      + P +    DP+ P+   +P N
Sbjct: 449 VVDDDMGIVTMREAPPSRPASSRASRTEIPPKEESKVDPMKPKQAHVPQN 498



 Score = 23.4 bits (48), Expect(2) = 5.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 245 ESIINQIFTSAKPPTQLQPVTQPSVADR 328
           ES+  Q + S +PP+  QP  +PS + R
Sbjct: 419 ESVPTQSY-SERPPSSQQPSPRPSASPR 445


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 425 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRP 544
           C +  ++I + G    ++ +  GPCS++ID C   PD+ P
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID-C--NPDELP 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,344,909
Number of Sequences: 27780
Number of extensions: 437874
Number of successful extensions: 1379
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3380764392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)