Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H21
(1244 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces pombe|c... 311 2e-85
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 218 2e-57
SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr ... 36 0.012
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 32 0.19
SPCC895.08c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.44
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 29 1.8
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 28 3.1
SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr... 27 4.1
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.1
SPBC32F12.05c |cwf12||complexed with Cdc5 protein Cwf12 |Schizos... 27 5.4
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 5.4
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 5.4
SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein Rad4|Schizosac... 27 7.2
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 27 7.2
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 26 9.5
>SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 392
Score = 311 bits (763), Expect = 2e-85
Identities = 152/301 (50%), Positives = 204/301 (67%), Gaps = 5/301 (1%)
Frame = +2
Query: 134 LCASHXPASKVPAFLNVVAIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVI 313
LC ++ P S+VPAFL V IAGL +GA+ G GLGNAFLSH++A DAI+ + RAFDD ++I
Sbjct: 73 LCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAEII 132
Query: 314 HVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGG---EKKLKPEYDSLA-KV 481
HV+GDV+P+RDL I +EL +KD E + +H+E L ++ +RG E K K E ++ KV
Sbjct: 133 HVEGDVDPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGANTLEMKAKKEEQAIIEKV 192
Query: 482 KTILVDEKKHIRFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEW 661
L + K+ IR GDWS ++E++N LT+KP +YLVN+SE+D++R+KNK+LPK+K+W
Sbjct: 193 YQYLTETKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSERDFLRQKNKYLPKIKKW 252
Query: 662 IDKNDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFT 841
ID+N PG LIP S E +L + E + K+ S L KIIV GY AL L +FT
Sbjct: 253 IDENSPGDTLIPMSVAFEERLTNFTEEEAIEECKKLNTKSMLPKIIVTGYNALNLINYFT 312
Query: 842 AGADEVKAWTIXKGTKAPQAAGRIHTDFEKGFIMXEVMHSRTSXK-XYRXXV*AAGKYRQ 1018
G DEV++WTI KGTKAPQAAG IHTDFEK F++ E+MH + AAGKY
Sbjct: 313 CGEDEVRSWTIRKGTKAPQAAGVIHTDFEKAFVVGEIMHYQDLFDYKTENACRAAGKYLT 372
Query: 1019 K 1021
K
Sbjct: 373 K 373
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 218 bits (532), Expect = 2e-57
Identities = 111/274 (40%), Positives = 164/274 (59%)
Frame = +2
Query: 134 LCASHXPASKVPAFLNVVAIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVI 313
LC + P +++PA L + AGL R +++G+GLGNAFLS+I++ DA+F L RAF + V
Sbjct: 98 LCEIYQPKTRIPAQLTIYDTAGLTRNSSKGEGLGNAFLSNIRSVDALFQLVRAFPEAQVP 157
Query: 314 HVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTIL 493
HV+ V+PVRDL+ I EEL LKD E L +++K R K D+ + ++
Sbjct: 158 HVEKSVDPVRDLQIIQEELLLKDAEFLESYLKKEGR-----SPKTCAKALDTARRALEVV 212
Query: 494 VDEKKHIRFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDKN 673
+ + + I +W+ I +LN LT+KP +YLVN+ + DY+ + + L +KEW++KN
Sbjct: 213 LGKGRQISKAEWNDEQIPILNSLNLLTAKPVVYLVNMDQDDYLSDEQEALKGIKEWVEKN 272
Query: 674 DPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGAD 853
G +IP S + E +L + P E G S L +II GY AL L ++FTA
Sbjct: 273 SFGDQVIPLSVLFEEQLFMLTPEEAAQECASLGKNSQLSEIICAGYSALNLIHYFTASEK 332
Query: 854 EVKAWTIXKGTKAPQAAGRIHTDFEKGFIMXEVM 955
V+AWTI G+KAP AAG IH+DF+K F+ EV+
Sbjct: 333 IVQAWTIADGSKAPDAAGIIHSDFKKKFVAGEVI 366
>SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 409
Score = 35.9 bits (79), Expect = 0.012
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 176 LNVVAIAGLVRGAAEGQGLGNAFLSHIKACDAIFNL 283
+ ++ +AGL+ GA G+GLGN FL ++ DA+ ++
Sbjct: 79 IQLLDVAGLIPGAHAGKGLGNKFLDDLRHADALVHV 114
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 31.9 bits (69), Expect = 0.19
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +2
Query: 191 IAGLVRGAAEGQGLGNAFLSHIK 259
I G+++GA++G+GLG FL H++
Sbjct: 296 IPGIIKGASDGKGLGYDFLRHVE 318
>SPCC895.08c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 490
Score = 30.7 bits (66), Expect = 0.44
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2
Query: 569 LTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDKNDPGSPLIPFSGVLESKLLDMDP 739
L S L NLS+ Y RK K KL EW+D D P+ F LES+L + P
Sbjct: 398 LASPSEASLPNLSK--YSRKNAK---KLNEWLDSLDFKLPIYLFHRKLESELSHLPP 449
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 28.7 bits (61), Expect = 1.8
Identities = 25/122 (20%), Positives = 53/122 (43%)
Frame = +2
Query: 272 IFNLCRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKL 451
+ L AF D++ +++ + P D T L E Q ++ ++ ++ KL
Sbjct: 222 LVKLYYAFQDKEKVYLAMEYVPGGDFRTFLTTKGLLHENQTRFYLAEMVAAIS--AVHKL 279
Query: 452 KPEYDSLAKVKTILVDEKKHIRFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKK 631
+ L K + L+D+K HI+ D+ + V + + + VN ++ Y+ +K
Sbjct: 280 GYMHRDL-KPENFLIDQKGHIKLSDFGLSTAIVTSNQVNRLQHALVSAVN-PQRPYLTQK 337
Query: 632 NK 637
+
Sbjct: 338 QR 339
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 437 GEKKLKPEYDSLAKVKTILVDEKKHIRF 520
GE++L+ + D ++ L+DEK H+RF
Sbjct: 67 GEEELEDDGDEAEDEQSFLLDEKLHLRF 94
>SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 323
Score = 27.5 bits (58), Expect = 4.1
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 320 DGDVNPVRDLETIAEELRLKDEEQL--LQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTIL 493
D + N ++ + +L++ E+ L L HIE ++ R + +K E +T+
Sbjct: 143 DSETNEEQERKFWLTKLQIAVEDTLDSLPHIEMEIDLLKRAQAELMKSEDSPEKDEETLR 202
Query: 494 VDEKKHIRFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRK 628
+E+K W D+ +K L ++P +S+++ RK
Sbjct: 203 REERKQKEGSSW-RLDLNTRDKILDKNNRPLQPFTIVSDRNETRK 246
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 380 DEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKKHIR 517
++ QL + +EK+ R + G E L ++ L LVDE+ ++
Sbjct: 179 EKTQLSEKVEKMKRSTDLGAEAVLPLDFQDLRVALLSLVDERNEMQ 224
>SPBC32F12.05c |cwf12||complexed with Cdc5 protein Cwf12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 350 ETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKKH 511
E++ E+ K EEQ +H+E L V + + + + + V+ IL++ +K+
Sbjct: 157 ESLLEDFEAKIEEQQHKHLENLGDEVEQDWKPLVIEQIPTRDDVEAILLERRKN 210
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 515 RFGDW--SAADIEVLNKYLFLTSKPALYLVNLSE 610
R DW +AA++ NK+ +TSK ++L++LS+
Sbjct: 97 RISDWIFNAAELGEENKFCVVTSKNQVHLLSLSK 130
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 677 PGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQ 805
P PL+P G+ + ++ + ++ + G S LDK++V+
Sbjct: 1398 PRKPLLPSFGIAKGSYSNVRIPSMLRFIADSGKLSKLDKLLVE 1440
>SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein
Rad4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 648
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 724 QFRFQHSREWNQRRAGVVFV 665
+F+ QH+ EWN R GV ++
Sbjct: 450 RFKIQHATEWNVRVVGVAWL 469
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 326 DVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEK 445
DVN D E L+DE+ L+ H+ K D +NR G K
Sbjct: 111 DVNRTHDGFRKRELFTLEDEKILIDHVHKND--INRFGTK 148
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.2 bits (55), Expect = 9.5
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 302 EDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQH----IEKLDRVVNRGGEKKLKPEYDS 469
+ VI D D NP DL+ +A R+ + ++ + + ++ V +K+ EY
Sbjct: 779 DTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEY-- 836
Query: 470 LAKVKTILVDEKKHIRFGDWSAADIEVLNKY 562
A + + D++K+ + +SA ++ + K+
Sbjct: 837 -AIISLGVTDKQKNSKNDKFSAEELSAILKF 866
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,939,395
Number of Sequences: 5004
Number of extensions: 78104
Number of successful extensions: 260
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 677341880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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