Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H21
(1244 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 310 2e-84
03_06_0179 - 32171712-32171780,32171861-32171920,32172096-321721... 182 5e-46
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 36 0.088
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 36 0.088
05_07_0148 + 28024820-28025293,28025655-28025702,28026034-280260... 33 0.47
12_01_1113 - 11888691-11888900,11891794-11892243,11892274-118929... 32 1.1
04_03_0685 + 18687520-18687787,18688637-18688725,18689102-186891... 30 3.3
04_01_0574 - 7450124-7450525,7450957-7451322 30 4.4
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482... 30 4.4
12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 29 5.8
04_04_1635 - 34943881-34945233,34945321-34945524 29 5.8
11_06_0391 - 23071997-23072278,23074390-23074476,23074623-23075003 29 7.6
>08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 310 bits (761), Expect = 2e-84
Identities = 163/324 (50%), Positives = 208/324 (64%), Gaps = 4/324 (1%)
Frame = +2
Query: 62 KTFLSCTIXXXXXXXXXXXXXSXSLCASHXPASKVPAFLNVVAIAGLVRGAAEGQGLGNA 241
+ F CTI LC + P S+V A+L + IAGLVRGA G+GLGNA
Sbjct: 24 ENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNA 83
Query: 242 FLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDR 421
FLSHI+A D IF++ RAF+D++V H+D V+PVRDLETI EELRLKD E + I+ L++
Sbjct: 84 FLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEK 143
Query: 422 VVNRGGEKKLKPEYDSLAKVKTILVDEKKHIRFGDWSAADIEVLNKYLFLTSKPALYLVN 601
+ R +K+LK E++ KVK L ++ K +RFGDW +ADIE+LN + LT+KP +YLVN
Sbjct: 144 SMKRSNDKQLKLEHELCEKVKAHL-EDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVN 202
Query: 602 LSEKDYIRKKNKWLPKLKEWIDKNDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITS 781
+SEKDY RKKNK+LPK+ W+ ++ G +IPFS E L DM P E Y E+ I
Sbjct: 203 MSEKDYQRKKNKFLPKIHAWVQEHG-GETIIPFSCAFERLLADMPPDEAAKYCAENQIAR 261
Query: 782 ---ALDKIIVQGYKALQLEYFFTAGADEVKAWTIXKGTKAPQAAGRIHTDFEKGFIMXEV 952
+ KII G+ A+ L YFFTAG DEVK W I + TKAPQAAG IHTDFE+GFI EV
Sbjct: 262 QAIVIPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEV 321
Query: 953 M-HSRTSXKXYRXXV*AAGKYRQK 1021
M V AAGKYRQ+
Sbjct: 322 MKFDDLKELGSESAVKAAGKYRQE 345
>03_06_0179 -
32171712-32171780,32171861-32171920,32172096-32172166,
32172246-32172273,32172356-32172502,32172626-32172904,
32172949-32173011,32173137-32173247,32173605-32173658,
32173761-32173949,32174275-32174670
Length = 488
Score = 182 bits (443), Expect = 5e-46
Identities = 104/276 (37%), Positives = 157/276 (56%), Gaps = 12/276 (4%)
Frame = +2
Query: 164 VPAFLNVVAIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVR 343
+P + +V IAGLV+GA++G+GLGN FLS+I+ D+I + R F+D+D++HV G V+P
Sbjct: 175 IPTSIELVDIAGLVKGASKGEGLGNQFLSNIREVDSILQVVRCFEDDDIVHVSGKVDPKS 234
Query: 344 DLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLK----------PEYDSLAKVKTIL 493
D++ I EL D +Q+ + ++KL + + + K+K E L K++T+L
Sbjct: 235 DIDVINLELIFSDLDQIEKRLDKLKKSKTKDQQVKVKIPTVLTTQEQAERTGLEKIQTVL 294
Query: 494 VDEKKHIRFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWID-K 670
+D K R D + + E + LT KP +Y+ N++E D N P +KE
Sbjct: 295 MDGKP-ARSVDLADHEKEAIQHLCLLTMKPVIYVANVTESDLAEPGNN--PHVKEVAKLA 351
Query: 671 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGIT-SALDKIIVQGYKALQLEYFFTAG 847
D S ++ S +E++L ++ ERV YLK G+T S L ++ Y L L +FT G
Sbjct: 352 TDLESGMVTISAQVEAELAELPLEERVEYLKSLGVTESGLGNLVKATYDLLGLRTYFTTG 411
Query: 848 ADEVKAWTIXKGTKAPQAAGRIHTDFEKGFIMXEVM 955
E KAWTI G APQAAG IH+DF+KGFI E +
Sbjct: 412 DKETKAWTILAGMTAPQAAGVIHSDFQKGFIRAETV 447
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 35.5 bits (78), Expect = 0.088
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 176 LNVVAIAGLVRGAAEGQGLGNAFLSHIK 259
+ V I GL++GA E +GLG+AFL HI+
Sbjct: 389 VKVADIPGLIKGAHENRGLGHAFLRHIE 416
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 35.5 bits (78), Expect = 0.088
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 191 IAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETIAEEL 370
+ GL+ GA G+GLG FL H++ I ++ A D+ PV D + + EEL
Sbjct: 338 LPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAAADD----------PVDDYKIVREEL 387
Query: 371 RLKDEEQL 394
R+ + + L
Sbjct: 388 RMYNPQYL 395
>05_07_0148 +
28024820-28025293,28025655-28025702,28026034-28026080,
28026334-28026496,28026595-28026656,28026820-28027003,
28027093-28027182,28027553-28027686,28027747-28027936,
28028103-28029033,28029860-28030065
Length = 842
Score = 33.1 bits (72), Expect = 0.47
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 359 AEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVK 484
A E+ +KD++QLLQ +E+L V++R +++ K + AK K
Sbjct: 287 AVEVNVKDDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDK 328
>12_01_1113 -
11888691-11888900,11891794-11892243,11892274-11892950,
11893396-11893957,11894121-11894207
Length = 661
Score = 31.9 bits (69), Expect = 1.1
Identities = 30/110 (27%), Positives = 47/110 (42%)
Frame = +2
Query: 503 KKHIRFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDKNDPG 682
+ H R +W AA +FL Y ++ + YI K+ +L +W ++ DP
Sbjct: 243 RHHGRGSNWRAAHTNRRGWVMFLG-----YPLDFRNQHYINKEVSLFGRLVDWQER-DP- 295
Query: 683 SPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEY 832
IP S +L + D+D RV LKE + L + G L E+
Sbjct: 296 ---IPGSVMLRAVFDDIDAVPRVFLLKELPLRGGLGQSWTFGVFVLNTEF 342
>04_03_0685 +
18687520-18687787,18688637-18688725,18689102-18689195,
18689237-18689304,18690300-18690383,18690458-18690745,
18691474-18691626
Length = 347
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 794 SCPMHSLCRVPSSKRHVQSDPCPA 723
S P+ LC +PSS+ H +DP P+
Sbjct: 51 SNPVRHLCGIPSSRCHAAADPAPS 74
>04_01_0574 - 7450124-7450525,7450957-7451322
Length = 255
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 251 HIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETI 358
H K C +F L A+DD++ +GD P D ET+
Sbjct: 156 HNKVCKCLFLLDLAYDDDE--EDEGDTTPAADPETL 189
>02_05_0077 +
25645730-25645993,25647172-25647648,25648027-25648237,
25648407-25648564,25648641-25648711,25648829-25648934,
25649008-25649094,25649701-25650252,25650337-25650403,
25650971-25651104,25651175-25651228,25651376-25651472,
25652007-25652212,25652287-25652367,25652543-25652608,
25653025-25653098,25653766-25653871
Length = 936
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 272 IFNLCRAFDDE-DVIH--VDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGE 442
+ N R+F+D D + + + +P R IAE R +D++ +L+ + D+V + G
Sbjct: 150 VANTTRSFEDRIDALQRKLSNETDPQRINGMIAEIKRYQDDKSILKQYIEGDQVYDDGKM 209
Query: 443 KKLKPE 460
K++PE
Sbjct: 210 YKVQPE 215
>12_01_0199 -
1467137-1467172,1467302-1467391,1468304-1468396,
1468488-1469515,1470005-1470552,1470656-1470695,
1473774-1475196
Length = 1085
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 374 LKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILV 496
LK + + + + +++RVV EK+L+ EY+S K+ I++
Sbjct: 742 LKSDLDIGRFLNRVERVVEEKREKELQSEYESRKKLPRIMM 782
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 365 ELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSL 472
++ + DEE L+ + ++ ++NRGGEK E DS+
Sbjct: 393 DIGVVDEEGYLRLVGRIKELINRGGEKISPIEVDSV 428
>11_06_0391 - 23071997-23072278,23074390-23074476,23074623-23075003
Length = 249
Score = 29.1 bits (62), Expect = 7.6
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Frame = +2
Query: 155 ASKVPAFLNVVAIAGLVRGAAEGQGL--GNAFLSHIK---ACDAIFNLCRAFDDEDVIHV 319
AS A L +V+ A +RG+ E QGL N ++ + A + L F+++ V +
Sbjct: 106 ASSPLAVLELVSTALRLRGSGEVQGLLAVNQIVNRDETGAAMAEVSELLTTFNEQVVFEI 165
Query: 320 DGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRG-GEKKLKPEYDSL-AKVKT 487
D L T +K E++ Q+ + ++ G G+KKL +++L K+KT
Sbjct: 166 PKDCISNDPLVTERNTKLVKFYEEIAQNRYQRYHLIEAGAGKKKLTKSWENLQTKLKT 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,088,959
Number of Sequences: 37544
Number of extensions: 520883
Number of successful extensions: 1605
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3841085160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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