Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H21
(1244 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 385 e-107
Z92806-2|CAB07257.1| 303|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical p... 29 6.8
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 29 6.8
AC024847-7|AAF60856.2| 261|Caenorhabditis elegans Hypothetical ... 29 9.0
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical protein
W08E3.3 protein.
Length = 395
Score = 385 bits (948), Expect = e-107
Identities = 193/325 (59%), Positives = 233/325 (71%), Gaps = 1/325 (0%)
Frame = +2
Query: 50 QQQLKTFLSCTIXXXXXXXXXXXXXSXSLCASHXPASKVPAFLNVVAIAGLVRGAAEGQG 229
+ Q + F CTI L + PASKVPAFLNV IAGLV+GA+EGQG
Sbjct: 45 EAQAENFPFCTIDPNESRVAVQDDRFDWLVNHYKPASKVPAFLNVTDIAGLVKGASEGQG 104
Query: 230 LGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIE 409
LGNAFLSH+ ACDA+F+LCRAFDD+DV HV+G+V+PVRDLE I+ EL KD + + ++
Sbjct: 105 LGNAFLSHVSACDALFHLCRAFDDDDVTHVEGEVDPVRDLEIISNELFAKDLQFIDGPLD 164
Query: 410 KLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKKHIRFGDWSAADIEVLNKYLFLTSKPAL 589
K++++ R +K K EYD+L +VK L +EKK +R W+ +IE+LNK+LFLT+KP +
Sbjct: 165 KVEKLFTRANDKTKKIEYDTLVRVKKCL-EEKKPVRQELWNEKEIEILNKHLFLTAKPIV 223
Query: 590 YLVNLSEKDYIRKKNKWLPKLKEWIDKNDPGSPLIPFSGVLESKLLDMDPTERVSYLKEH 769
YLVNLSEKDYIRKKNKWLPK+K WID ND G+ LIPFSG E KLLDM ER YLKE
Sbjct: 224 YLVNLSEKDYIRKKNKWLPKIKAWIDTNDAGAVLIPFSGAFELKLLDMPEDERQKYLKEQ 283
Query: 770 GITSALDKIIVQGYKALQLEYFFTAGADEVKAWTIXKGTKAPQAAGRIHTDFEKGFIMXE 949
G+TS LDKI+ GYKALQLEYFFT+G DEVKAWTI GT AP+AAGRIHTDFEKGFIM E
Sbjct: 284 GVTSNLDKIVHTGYKALQLEYFFTSGEDEVKAWTIQVGTPAPKAAGRIHTDFEKGFIMAE 343
Query: 950 VMHSRTSXK-XYRXXV*AAGKYRQK 1021
VM + A GKYRQ+
Sbjct: 344 VMKVADLIELGDEAKCKAGGKYRQQ 368
>Z92806-2|CAB07257.1| 303|Caenorhabditis elegans Hypothetical
protein K10G4.2 protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.7
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 829 LQLQSLISLNNDLVQCTRYAVFLQVRDTFSRIHVQQFRF-QHSREWNQRRAGVVFVDPLF 653
L L SL L++DL +V+L V TF R V ++ F Q + +AG+ V P+F
Sbjct: 44 LALSSLEMLSSDL------SVWLAVFMTFFRALVMRYPFHQRINSLVKSKAGLCAVIPIF 97
Query: 652 ELW*PFVLF 626
L PF+LF
Sbjct: 98 VLISPFMLF 106
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 182 VVAIAGLVRGAAEGQGLGNAFLSHIKACDAIF 277
V I GL+ + +GLG +FL HI+ C++++
Sbjct: 240 VADIPGLIEDSHLNKGLGISFLKHIERCESLW 271
>Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical
protein Y48E1B.7 protein.
Length = 751
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 371 RLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKK 508
RL ++++ I+ D + N KLK Y+ LAK++ L++ ++
Sbjct: 568 RLSSSNEVIKQIDYRDLIPNESTLLKLKKAYNYLAKIENELLNPRR 613
Score = 28.7 bits (61), Expect = 9.0
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +2
Query: 314 HVDGDVNPVRDLETIAEELRLKDE----EQLLQHIEKLDRVVNRGGEK-KLKPEYDS 469
HV+ D PV + E + EEL +++E EQ + E + V R G K KP++DS
Sbjct: 696 HVEEDYLPVEE-ELVEEELVVEEEALPVEQHQEEEEDGEPTVTRAGRVVKKKPQFDS 751
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 815 PYILEQ*SCPMHSLCRVPSSKRHVQSDPCPAI*IPTLQR 699
P+ILE P+HS C +PSS + + P P I +QR
Sbjct: 396 PFILENADDPLHSRCILPSSCPEIPT-PAPEIVEQFVQR 433
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 815 PYILEQ*SCPMHSLCRVPSSKRHVQSDPCPAI*IPTLQR 699
P+ILE P+HS C +PSS + + P P I +QR
Sbjct: 187 PFILENADDPLHSRCILPSSCPEIPT-PAPEIVEQFVQR 224
>AC024847-7|AAF60856.2| 261|Caenorhabditis elegans Hypothetical
protein Y65B4BR.2 protein.
Length = 261
Score = 28.7 bits (61), Expect = 9.0
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 557 KYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDKNDPGSPLIPFSGVLESKLLDMD 736
+Y+ L S P Y + +D + KW ++ ++++KN SP+ + L D+D
Sbjct: 191 QYMIL-STPLKYPTMVLTRDLTLFETKWKREVYDFVEKNGFMSPMAALNTRLH--FTDVD 247
Query: 737 PTERVSYLKEHG 772
+V+ L E+G
Sbjct: 248 VCRKVNKLYENG 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,841,889
Number of Sequences: 27780
Number of extensions: 439832
Number of successful extensions: 1537
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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