Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H20
(1270 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 277 2e-75
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 144 2e-35
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 139 9e-34
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 138 1e-33
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 127 3e-30
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 117 4e-27
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 114 2e-26
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 111 1e-25
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 107 2e-24
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 105 1e-23
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 87 6e-18
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 82 2e-16
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 75 3e-14
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 52 2e-07
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 27 5.5
SPAC23G3.09 |taf4||transcription factor TFIID complex subunit Ta... 27 7.3
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 27 7.3
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 9.6
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 277 bits (679), Expect = 2e-75
Identities = 124/147 (84%), Positives = 131/147 (89%)
Frame = +1
Query: 331 MALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 510
MALK INREL LG+DPP+ CSAGP G+DLFHWQATIMGP DSPY GGVFFL+IHFPTDY
Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60
Query: 511 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLV 690
PFKPPKV FTTRIYHPNINSNGSICLDILR QWSPALTISKVLLSICSLL DPNPD PLV
Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 691 PEIARIYKTDREKYNELAREWTRKYAM 771
PEIA +YKTDR +Y AREWTRKYA+
Sbjct: 121 PEIAHVYKTDRSRYELSAREWTRKYAI 147
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 144 bits (350), Expect = 2e-35
Identities = 70/148 (47%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Frame = +1
Query: 331 MAL-KXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 507
MAL K I +E++ L RDPP A P ++L +++ T+ GP S Y+GG F L + P +
Sbjct: 1 MALPKRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDE 60
Query: 508 YPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPL 687
YP PP V F T+IYHPN++ G ICL L+ WSPAL I VLLSI +L+ PNPD PL
Sbjct: 61 YPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPL 120
Query: 688 VPEIARIYKTDREKYNELAREWTRKYAM 771
++A+I+K + + AREWT+KYA+
Sbjct: 121 DNDVAKIWKENEPQAIANAREWTKKYAV 148
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 139 bits (336), Expect = 9e-34
Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 504
S + + + +E L P ++LFHW T +GP DS Y GG F ++ FP
Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPL 64
Query: 505 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVLLSICSLLCDPNPDX 681
DYPF+PP + FTTRIYHPN +S G++CL IL+ Q + P++ + VL I LL +PNPD
Sbjct: 65 DYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDD 124
Query: 682 PLVPEIARIYKTDREKYNELAREWTRKYA 768
PLV IA Y+ DR ++++AR++ ++A
Sbjct: 125 PLVASIAEQYRNDRPSFDKIARDYVEQFA 153
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 138 bits (335), Expect = 1e-33
Identities = 61/144 (42%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
Frame = +1
Query: 340 KXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 519
+ I +EL + +D A +D+ H + GP +PY+GG F + I P DYPF+
Sbjct: 7 RRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFR 66
Query: 520 PPKVAFTTRIYHPNINS-NGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLVPE 696
PPK+ F T+IYHPN++S G+ICLDIL+ QWSP T+ L+S+ SLLC P P P +
Sbjct: 67 PPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQ 126
Query: 697 IARIYKTDREKYNELAREWTRKYA 768
+A++Y + +++ AREWT YA
Sbjct: 127 VAQVYLQNYQQFVRTAREWTSSYA 150
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 127 bits (307), Expect = 3e-30
Identities = 55/142 (38%), Positives = 89/142 (62%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 504
S A + + R+ + + +DPPA SA P +++ W A I+GP D+P++ G F L + F
Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDE 61
Query: 505 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXP 684
YP KPP V F + ++HPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPN P
Sbjct: 62 QYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASP 121
Query: 685 LVPEIARIYKTDREKYNELARE 750
E A++++ ++++Y R+
Sbjct: 122 ANAEAAQLHRENKKEYVRRVRK 143
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 117 bits (281), Expect = 4e-27
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
Frame = +1
Query: 415 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 591
D+FHW+A I GP ++PY+GG + L IH YP PP V F T+I HPNI+ +NG +C+D
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92
Query: 592 ILRAQWSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKT-DREKYNELAREWTRKYA 768
IL+ WSPA ++ L+I SLL + + PL + A++ +T D+ YN L R T YA
Sbjct: 93 ILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYA 152
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 114 bits (275), Expect = 2e-26
Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 14/158 (8%)
Frame = +1
Query: 331 MALKXINRELQXLGRDPPAQCSAGPHGED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTD 507
MAL+ + +E + L + P +AGP ED F W I GP +P++GG++ T+ FP+D
Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSD 64
Query: 508 YPFKPPKVAFTTRIYHPNINSNGSICLDILRA-------------QWSPALTISKVLLSI 648
YP PP + F +HPN+ +G++C+ IL A +WSP ++ K+LLS+
Sbjct: 65 YPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSV 124
Query: 649 CSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRK 762
S+L +PN + + ++++ DRE+Y + R RK
Sbjct: 125 MSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 111 bits (268), Expect = 1e-25
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Frame = +1
Query: 340 KXINRELQXLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 516
K + EL L SA P + +L HW TI GP D+ Y+G F +++ FP +YP+
Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPY 90
Query: 517 KPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLVPE 696
PP + FT+ ++HPN++ +G+ICLDIL+ +WS + +LLS+ SLL +PN PL +
Sbjct: 91 SPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQ 150
Query: 697 IARIYKTDREKYNEL 741
A ++ D +Y L
Sbjct: 151 AAELWSKDPIEYKRL 165
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 107 bits (258), Expect = 2e-24
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Frame = +1
Query: 391 CSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 570
C + G DL +W+ I G + ++GG++ LT+ FP +YP +PPK FT ++HPN+
Sbjct: 29 CKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYP 88
Query: 571 NGSICLDILRAQ--WSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELA 744
+G++CL IL + W PA+TI ++LL I LL DPN P E ++K D+ +Y +
Sbjct: 89 SGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRV 148
Query: 745 REWTRKYA 768
R R+ A
Sbjct: 149 RAQARENA 156
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 105 bits (253), Expect = 1e-23
Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 14/160 (8%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 501
S + + + ++L+ + ++PP S G + +F W+ I+GP D+ Y+GG F T+ FP
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFP 62
Query: 502 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------AQWSPALTISKVLL 642
DYP PPK+ FTT I+HPN++ NG +C+ IL +W P + +L+
Sbjct: 63 QDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILI 122
Query: 643 SICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRK 762
S+ S+L PN + P + A+ ++ + +++ + R R+
Sbjct: 123 SVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRR 162
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 86.6 bits (205), Expect = 6e-18
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +1
Query: 445 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPAL 621
GP ++PY GG++ + + P++YP+K P + F RI+HPNI+ +GS+CLD++ WSP
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMF 97
Query: 622 TISKVL-LSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
+ + + + LL PN PL E A + + Y R++ +YA
Sbjct: 98 DMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 81.8 bits (193), Expect = 2e-16
Identities = 37/100 (37%), Positives = 54/100 (54%)
Frame = +1
Query: 448 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 627
P + Y+GG F I +YP PPKV +IYHPNI+ G++CL+ILR W+P L +
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNL 119
Query: 628 SKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAR 747
+ +L+ + L PN + PL E A D + + R
Sbjct: 120 NSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 74.5 bits (175), Expect = 3e-14
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 504
S+ A K + +E L ++P A P E++ W I GP D+PY+GG + T+ FP
Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPP 62
Query: 505 DYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLL-CDPN 672
DYPFKPP + T +N +CL D W+P+ +S +L+ + S + D
Sbjct: 63 DYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMTSDEI 120
Query: 673 PDXPLV--PEIARIYKTDREKYN 735
+V R Y D +++N
Sbjct: 121 TTGGIVTSESTRRTYAKDTKRFN 143
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 52.0 bits (119), Expect = 2e-07
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Frame = +1
Query: 385 AQCSAGPHGED---LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 555
+ CS G D L W ATI+GP S ++ ++ L IH +YP PP V F +RI
Sbjct: 24 SSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINL 83
Query: 556 PNIN-SNGSI---CLDILRAQWSPALTISKVLLSI-CSLLCDPNPDXPLVPE 696
P ++ G + +D LR W ++ VLL + + N P PE
Sbjct: 84 PGVDGETGKVNPHKIDCLR-HWKREYSMETVLLDLKKEMASSSNRKLPQPPE 134
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 607 WSPALTISKVLLSICSLLCDPNPDXPLVPEI 699
+SPA I KVL + L DPN + P++P+I
Sbjct: 291 FSPAPFIQKVLSRL--LPSDPNVEMPMIPQI 319
>SPAC23G3.09 |taf4||transcription factor TFIID complex subunit
Taf4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 26.6 bits (56), Expect = 7.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 322 NSQMALKXINRELQXLGRDPPAQCSAG---PHGEDLFHWQATIMGPVDSPYQGGVF 480
+S A K I+ + Q + A AG P G + W AT M P+ +P GG F
Sbjct: 246 SSSAAAKNISEDAQNRMTNATASIMAGSALPSGGKKYSWMATDMTPM-TPAVGGGF 300
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +2
Query: 386 HNVRQAHTVKIC---SIGKPQLWAQLTVLIKEEFSSLPYISLQTTLSNHQ 526
H V +T C ++ P LWA L + F Y L+T N+Q
Sbjct: 406 HTVFSGYTTVWCPQNAVFVPGLWANLATRYRASFMLTDYAGLKTIAYNYQ 455
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 502 TDYPFKPPKVAFTTRIYHPNINSN 573
TD FKP + T +++P+I +N
Sbjct: 113 TDKKFKPNDTSITANVFNPSIQNN 136
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,931,644
Number of Sequences: 5004
Number of extensions: 80383
Number of successful extensions: 199
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 689550766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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