Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H20
(1270 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 301 9e-82
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 301 9e-82
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 138 6e-33
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 128 6e-30
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 128 6e-30
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 116 3e-26
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 113 2e-25
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 113 3e-25
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 100 4e-21
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 99 8e-21
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 96 4e-20
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 95 9e-20
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 91 2e-18
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 91 2e-18
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 87 2e-17
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 86 6e-17
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 75 1e-13
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 74 2e-13
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 71 1e-12
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 70 3e-12
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 66 5e-11
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 65 1e-10
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 64 2e-10
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 62 8e-10
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 43 5e-04
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 34 0.25
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 30 3.0
Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical pr... 30 4.0
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 29 7.0
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 7.0
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 301 bits (738), Expect = 9e-82
Identities = 134/147 (91%), Positives = 141/147 (95%)
Frame = +1
Query: 331 MALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 510
MALK I +ELQ LGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 511 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLV 690
PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTISKVLLSICSLLCDPNPD PLV
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
Query: 691 PEIARIYKTDREKYNELAREWTRKYAM 771
PEIARIYKTDRE+YN+LAREWT+KYAM
Sbjct: 121 PEIARIYKTDRERYNQLAREWTQKYAM 147
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 301 bits (738), Expect = 9e-82
Identities = 134/147 (91%), Positives = 141/147 (95%)
Frame = +1
Query: 331 MALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 510
MALK I +ELQ LGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 511 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLV 690
PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALTISKVLLSICSLLCDPNPD PLV
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
Query: 691 PEIARIYKTDREKYNELAREWTRKYAM 771
PEIARIYKTDRE+YN+LAREWT+KYAM
Sbjct: 121 PEIARIYKTDRERYNQLAREWTQKYAM 147
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 138 bits (335), Expect = 6e-33
Identities = 67/143 (46%), Positives = 89/143 (62%)
Frame = +1
Query: 340 KXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 519
+ I +E Q L DP SA P + ++ I GP DSP+ GGVF L + P +YP
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 520 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLVPEI 699
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNP+ PL ++
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDV 126
Query: 700 ARIYKTDREKYNELAREWTRKYA 768
A +KT+ + + A++WT YA
Sbjct: 127 AEQWKTNEAEAIKTAKQWTMNYA 149
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 128 bits (310), Expect = 6e-30
Identities = 53/137 (38%), Positives = 90/137 (65%)
Frame = +1
Query: 340 KXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 519
+ + R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 520 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLVPEI 699
PP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 700 ARIYKTDREKYNELARE 750
A++Y+ +R +Y + ++
Sbjct: 127 AQLYQENRREYEKRVQQ 143
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 128 bits (310), Expect = 6e-30
Identities = 53/137 (38%), Positives = 90/137 (65%)
Frame = +1
Query: 340 KXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 519
+ + R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 520 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDXPLVPEI 699
PP V F ++++HPN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 700 ARIYKTDREKYNELARE 750
A++Y+ +R +Y + ++
Sbjct: 127 AQLYQENRREYEKRVQQ 143
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 116 bits (280), Expect = 3e-26
Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +1
Query: 412 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL 588
E+L + I GP D+PY GG+F L I P YPF PP V F+T+I+HPN++S G ICL
Sbjct: 34 ENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICL 93
Query: 589 DILRAQWSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
DIL+ QW+ +LT+ VLLSI +L+C P P P +A+ Y + A WT K+A
Sbjct: 94 DILKDQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFA 153
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 113 bits (273), Expect = 2e-25
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = +1
Query: 415 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 594
+L W ++ P PY G F + I FP DYPFKPPKVAF T+IYHPN++ G CL I
Sbjct: 31 NLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPI 89
Query: 595 LRAQ-WSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
+ A+ W PA +V++++ SL+ +P P P+ ++A ++ D +K+ + A E TRK+A
Sbjct: 90 VTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 113 bits (272), Expect = 3e-25
Identities = 59/157 (37%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Frame = +1
Query: 334 ALKXINRELQXLGRDPPAQCSAGPHGED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 510
ALK + E + L PP A P ED F W+ I GP ++ + GVF I FP DY
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 511 PFKPPKVAFTTRIYHPNINSNGSICLDILRA-------------QWSPALTISKVLLSIC 651
P PPK+ FT I+HPNI ++G +C+ IL A +WSP +I K+LLS+
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVV 124
Query: 652 SLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRK 762
S+L +PN + P A++++ DR ++ ++A RK
Sbjct: 125 SMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRK 161
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 99.5 bits (237), Expect = 4e-21
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 504
S AL+ + EL+ L P + + ++LF W I GP + YQGG F +I FP+
Sbjct: 8 SSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPS 67
Query: 505 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRA-------------QWSPALTISKVLLS 645
+YP+ PP + FTT+++HPN+ NG +C+ IL + +W+P ++ +LLS
Sbjct: 68 NYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLS 127
Query: 646 ICSLLCDPNPDXPLVPEIARIYKTDRE 726
+ SLL +PN P + + +Y+ +E
Sbjct: 128 VISLLNEPNTSSPANVDASVMYRKWKE 154
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 98.7 bits (235), Expect = 8e-21
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Frame = +1
Query: 346 INRELQXLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP 522
+ ++L + R P SAG D++ W+ ++GP D+ Y+GG F + FP DYP KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 523 PKVAFTTRIYHPNINSNGSICLDIL-------------RAQWSPALTISKVLLSICSLLC 663
PK+ F + I+HPNI+ G++C+ IL +W P T+ +LLS+ S+L
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 664 DPNPDXPLVPEIARIYKTDREKYNELARE 750
DPN + P + A K RE Y E ++
Sbjct: 128 DPNFESPANVDAA---KMQRENYAEFKKK 153
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 96.3 bits (229), Expect = 4e-20
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = +1
Query: 331 MALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTI 492
MALK I +EL LGRDPPAQCS G G+DL+HWQATIMGP +SPYQGG+FFLTI
Sbjct: 1 MALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 95.1 bits (226), Expect = 9e-20
Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 20/168 (11%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAGPHGE----DLFHWQATIMGPVDSPYQGGVFFLTI 492
S +AL + R+ + + AG H E +L + I GP +PY GG F + +
Sbjct: 16 SNLALARVTRKCKEVANASDIT-EAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKV 74
Query: 493 HFPTDYPFKPPKVA---------------FTTRIYHPNINSN-GSICLDILRAQWSPALT 624
P YPF+PPKV F TRI+HPNI+S G+ICLDIL+ +W+ +LT
Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLT 134
Query: 625 ISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
+ VLLS+ ++LC P P P +A+ + + + A WT +A
Sbjct: 135 LRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/120 (33%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 415 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 594
+LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 595 L--RAQWSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
L W P+++I ++L+ I LL PN + P E +IY +R +Y + ++ KYA
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/120 (33%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 415 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 594
+LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 595 L--RAQWSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
L W P+++I ++L+ I LL PN + P E +IY +R +Y + ++ KYA
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 87.0 bits (206), Expect = 2e-17
Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = +1
Query: 430 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL-DILRA 603
Q I G ++PY+GG+F L I YPFK P V F T+I+HP+++ +G+ICL D+
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNG 441
Query: 604 QWSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
W ++TI KVL+ I S + + N P+ EI +RE + + A WT+++A
Sbjct: 442 VWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFA 496
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 85.8 bits (203), Expect = 6e-17
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +1
Query: 445 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWSPAL 621
GP D+ Y+ GV+ + + P YPFK P + F +I+HPNI+ ++G++CLD++ W+
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 622 TISKVL-LSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRKYA 768
++ + + LL PN PL E AR+Y E+Y RE+ ++A
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFA 150
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 74.9 bits (176), Expect = 1e-13
Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAG--PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHF 498
S A + + +EL L + P DL W+ ++G + Y G VF L F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
Query: 499 PTDYPFKPPKVAFT--TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 660
YPF P+V F T HP+I SNG ICL IL W+PAL++ V LSI S+L
Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSML 117
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 504
S +AL+ + ++ Q L ++P A P ++ W+ I+G +PY+GG++ + FP
Sbjct: 6 STVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPK 65
Query: 505 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ---WSPALTISKVLLSICSLLCDPNP 675
D+PFKPP + T + +N +CL I W+PA T+S ++ + S + D P
Sbjct: 66 DFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQP 123
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 71.3 bits (167), Expect = 1e-12
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Frame = +1
Query: 409 GEDLF-HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC 585
G D++ W T+ GP SP++GG + ++++F +P PP F T ++HPN++ GSI
Sbjct: 64 GADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIY 122
Query: 586 LDILRAQ-WSPALTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELAR--EWT 756
L +L + WS ++ K+L I +LL P+ E Y+ RE Y AR WT
Sbjct: 123 LKMLEQEHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWT 182
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 70.1 bits (164), Expect = 3e-12
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Frame = +1
Query: 448 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ------W 609
P + Y+GG F I P +Y PP V T+++HPNIN +GSICL ILR W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 610 SPALTISKVLLSICSLLCD-PNPDXPLVPEIARIYKTDREKYNELAREWTRKY 765
P ++ V+ + SL D + + L + A+++ +RE +N RE+ +Y
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 66.1 bits (154), Expect = 5e-11
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 12/82 (14%)
Frame = +1
Query: 439 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNINSNGSICLDIL-- 597
I GP D+PY G+F I FPT YPF PPK AF T ++PN+ ++G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 598 -----RAQWSPALTISKVLLSI 648
+W+P ++ +VL+SI
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSI 530
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 64.9 bits (151), Expect = 1e-10
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Frame = +1
Query: 463 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLD-ILRAQWSPALTISKV 636
Y+ +F LT+ +YPFKPP + F +YHPN++ +C +L+ W P T+ V
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 637 LLSICSLLCDPNPDXPLVPEIARIYKTDR----EKYNELAREW 753
LL++ LL +P+ P+ + A Y ++ +K ELA++W
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAKKW 159
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 64.5 bits (150), Expect = 2e-10
Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Frame = +1
Query: 325 SQMALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 504
S A++ + ++ L +DP A P+ +++ W + G D+P+ GG ++ + F
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKE 76
Query: 505 DYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALTISKVLLSICSLLCDPNP 675
++P+ PP + T + +N +CL D W+P T+S +L+ + S + + +P
Sbjct: 77 NFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFMNENSP 134
Query: 676 DXPLV---PEIARIYKTDREKYNELAREW 753
+ P+ R+Y +++N W
Sbjct: 135 AAGSIAGTPQDQRMYAAASKEFNVKVYNW 163
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 62.1 bits (144), Expect = 8e-10
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Frame = +1
Query: 295 VESQYNST*NSQMALKXINRELQXLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGG 474
+ QYN+ ++ + +E L R P A P ++LF W TI G + + ++GG
Sbjct: 1 MSEQYNT---KNAGVRRLMKEAMEL-RQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGG 56
Query: 475 VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL---RAQWSPALTISKVLLS 645
++ I FP DYP KPP + T + N +CL I W P+ +I LL+
Sbjct: 57 IYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSISGYHPETWLPSWSIRTALLA 114
Query: 646 ICSLLCDPNPDXPLVPEIARIYKTDREKYNELAREWTRK 762
+ L P+ + + K +R++ +L+ EW K
Sbjct: 115 LIGFL--PSTPGGALGSLDYPPK-ERQRLAKLSCEWKCK 150
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 52.4 bits (120), Expect = 7e-07
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +1
Query: 418 LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI---C 585
L W A+I+GP +PY+ ++ L I +YP +PP V FTT+++ +N SNG I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97
Query: 586 LDILRAQWSPALTISKVLLSI 648
L LR WS + I VL I
Sbjct: 98 LTTLR-NWSNSYMIKTVLEDI 117
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 46.4 bits (105), Expect = 4e-05
Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Frame = +1
Query: 418 LFHWQATIMGPVDSPYQGGVFFLTIHF-PTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 594
LFH I GPV S Y+GG FF I+ P P+V F T I+HPN+ G+ D+
Sbjct: 63 LFH--VIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN--WDM 118
Query: 595 LRAQWSPALTISKVLLSICSLLCDPNPDXP----------LVPEIARIYKTDREKYNELA 744
QW + + I + + D P I+R+ K D K+ A
Sbjct: 119 RGIQWERRSNLEVLYNFIVEGMRNVKYDIERRNLAQLEDMSQPNISRLAKEDWPKFERTA 178
Query: 745 REWTRKYA 768
RE+ K A
Sbjct: 179 REFVMKMA 186
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 42.7 bits (96), Expect = 5e-04
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 439 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 591
I GP D+PY+ GVF + + FP +YP P++ F T I++ + S G + ++
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIE 86
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Frame = +1
Query: 463 YQGGVFFLTIHFPTDYPFKP--PKVAFT-TRIYHPNI-NSNGSICLDILRAQ-WSP---A 618
+ GG+F IH P ++P P+V F + ++HP I + +CL+ + W +
Sbjct: 62 FGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKELCLNRSFPEGWKKEKHS 121
Query: 619 LTISKVLLSICSLLCDPNPDXPLVPEIARIYKTDREKYNELARE 750
L V+L D + D + PE + +YK R+K+ E+A+E
Sbjct: 122 LRRVLVVLQRSFYSYDVDTDKCINPEASVLYKEHRDKFREIAKE 165
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.25
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 478 FFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSL 657
+ +T+ P +PF PP + T + N L + QW P+ I VL+ CS+
Sbjct: 51 YIVTVAIPPKFPFSPPAITCKT-------DKNMKF-LFLEENQWKPSTGIVAVLIEACSV 102
Query: 658 LC--DPNPDXPLVPEI 699
+ D P P++P I
Sbjct: 103 ISRRDLVPRAPVLPRI 118
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 470 EEFSSLPYISLQTTLSNHQKLHSQHVFIILT*TVMVPSVLTFCVHSGHQRSPYPKCCSQS 649
EE++ + + T Q Q+V +++T ++M PS++T + G Q + P+
Sbjct: 1202 EEYTPMNFAPPPTFTYPQQMPMMQYVPVMMTSSMMTPSMMTPSMMPGQQIAMVPQQMMMQ 1261
Query: 650 AHFYAIP 670
HF +P
Sbjct: 1262 PHFSYVP 1268
>AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 166 protein.
Length = 363
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 481 FLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSIC 651
F I+ P P + ++ +I + +++ + D LR QW P ++ KVL+ C
Sbjct: 300 FCLINNPRSAPSRLLEIISINQILNRQFHASYKL-FDALRKQWDPTMSFQKVLVESC 355
>Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical
protein C04F12.8 protein.
Length = 272
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 532 AFTTRIYHPNINSNGSICLDILRAQWSP-ALTISKVLLSICSLLCDPNPDXPLVPEIARI 708
AF+ Y P+++S S+ LR +SP +L S + L+ L P P + +
Sbjct: 200 AFSASTYRPSVSSASSLATSSLRRAYSPSSLPASSLALTTSYSLFSPAPTRKPRQSLFSM 259
Query: 709 YKT 717
Y T
Sbjct: 260 YST 262
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -3
Query: 809 CVYVLLMSQLTHHMAYFLVHSRANSLYFSLSV 714
C++++L+ + HM+++ + + +Y SL V
Sbjct: 315 CIHIILLESFSQHMSFYFYYHEESMMYASLLV 346
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 519 FERVVCREMYGKEENSSLIRTVNWA--HNCGLPMEQIF 412
FER+ C E + +N+ T W HNC +P+EQ+F
Sbjct: 185 FERLACLEQW---KNAKTFETP-WVLVHNCQIPIEQLF 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,283,225
Number of Sequences: 27780
Number of extensions: 473301
Number of successful extensions: 1208
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3537281262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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