Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H18
         (1266 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06589-2|CAA29813.1|  964|Drosophila melanogaster su(wa) protein...    30   7.7  
X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein...    30   7.7  
AY118635-1|AAM50004.1|  964|Drosophila melanogaster SD01276p pro...    30   7.7  
AL132651-1|CAB65880.1| 1032|Drosophila melanogaster EG:BACR7A4.1...    30   7.7  
AL109630-17|CAB65879.1| 1032|Drosophila melanogaster EG:BACR7A4....    30   7.7  
AE014298-146|AAG22382.2|  963|Drosophila melanogaster CG3019-PA,...    30   7.7  
AE014298-145|ABI30963.1|  927|Drosophila melanogaster CG3019-PF,...    30   7.7  
AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA...    30   7.7  

>X06589-2|CAA29813.1|  964|Drosophila melanogaster su(wa) protein
           protein.
          Length = 964

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 771 TNPPFSPTAAPYPVTIVLSPXGKTRLIATGSS 866
           + P   PTAAP P  ++LS     +L+AT S+
Sbjct: 797 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTST 828


>X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein
           protein.
          Length = 1042

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 771 TNPPFSPTAAPYPVTIVLSPXGKTRLIATGSS 866
           + P   PTAAP P  ++LS     +L+AT S+
Sbjct: 875 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTST 906


>AY118635-1|AAM50004.1|  964|Drosophila melanogaster SD01276p
           protein.
          Length = 964

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 771 TNPPFSPTAAPYPVTIVLSPXGKTRLIATGSS 866
           + P   PTAAP P  ++LS     +L+AT S+
Sbjct: 797 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTST 828


>AL132651-1|CAB65880.1| 1032|Drosophila melanogaster
           EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
          Length = 1032

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 771 TNPPFSPTAAPYPVTIVLSPXGKTRLIATGSS 866
           + P   PTAAP P  ++LS     +L+AT S+
Sbjct: 865 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTSA 896


>AL109630-17|CAB65879.1| 1032|Drosophila melanogaster
           EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
          Length = 1032

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 771 TNPPFSPTAAPYPVTIVLSPXGKTRLIATGSS 866
           + P   PTAAP P  ++LS     +L+AT S+
Sbjct: 865 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTSA 896


>AE014298-146|AAG22382.2|  963|Drosophila melanogaster CG3019-PA,
           isoform A protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 771 TNPPFSPTAAPYPVTIVLSPXGKTRLIATGSS 866
           + P   PTAAP P  ++LS     +L+AT S+
Sbjct: 796 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTST 827


>AE014298-145|ABI30963.1|  927|Drosophila melanogaster CG3019-PF,
           isoform F protein.
          Length = 927

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 771 TNPPFSPTAAPYPVTIVLSPXGKTRLIATGSS 866
           + P   PTAAP P  ++LS     +L+AT S+
Sbjct: 776 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTST 807


>AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA
           protein.
          Length = 660

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +2

Query: 611 PPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 739
           P GSS + SPVP  PL    SA +P+ +V L+    C    SV
Sbjct: 263 PSGSSFMPSPVPPAPLPA--SASVPAPTVPLATQISCPSAPSV 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,456,827
Number of Sequences: 53049
Number of extensions: 987356
Number of successful extensions: 2741
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2741
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6804617070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)