Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H17
(1304 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1133 - 26368323-26369457,26369556-26369635,26370145-263702... 46 9e-05
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 46 9e-05
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 41 0.002
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 31 1.5
12_02_0947 + 24680119-24681497,24682213-24682275,24683380-246842... 30 3.5
01_06_1610 - 38625427-38625726,38625814-38625885,38626001-386261... 30 3.5
12_01_0750 - 6754126-6755248,6755331-6755791 30 4.6
07_03_0407 - 17791696-17791831,17792531-17792646,17794029-177942... 30 4.6
06_01_0061 + 527417-527856,527957-528017,528113-528685 30 4.6
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 30 4.6
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 29 6.1
10_08_0351 - 17069974-17070232,17070470-17071751,17071908-170719... 29 8.1
07_03_0200 - 15016084-15016342,15016814-15016869,15016963-150179... 29 8.1
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 29 8.1
>12_02_1133 -
26368323-26369457,26369556-26369635,26370145-26370201,
26370508-26370601,26371006-26371092,26371179-26371268,
26371396-26371649
Length = 598
Score = 45.6 bits (103), Expect = 9e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -3
Query: 168 EFQVSVSSMPGHTRHIQSLILDNDIELLDCPGLVLPAYA 52
E + V+ PG T+H Q+LI+ ++ L DCPGLV P+++
Sbjct: 336 EKKTGVTHTPGKTKHFQTLIISEELTLCDCPGLVFPSFS 374
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 45.6 bits (103), Expect = 9e-05
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -3
Query: 162 QVSVSSMPGHTRHIQSLILDNDIELLDCPGLVLPAYA 52
+ V+S PG T+H Q+L++ ++ L DCPGLV P+++
Sbjct: 355 RTGVTSTPGKTKHFQTLVISEELILCDCPGLVFPSFS 391
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -3
Query: 159 VSVSSMPGHTRHIQSLILDNDIELLDCPGLVL 64
V+V S PG TR +Q + LD ++LLDCPG+V+
Sbjct: 294 VNVGSTPGVTRSMQEVQLDKKVKLLDCPGVVM 325
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +2
Query: 524 NALQPSDSGADLTYQDYHSDYISHDKLEQLDHDTEALIENENYLSEDTWEKFWAIHGERL 703
++ PS S A Y+D+ DY + L D N S D E+ E
Sbjct: 176 HSYSPSPSPARRDYRDHRDDYSPGESLSPHGQDKRHHRSNGRSASPDELERHARQAFE-- 233
Query: 704 IWASWIKKY 730
+W+SWIK +
Sbjct: 234 VWSSWIKSW 242
>12_02_0947 +
24680119-24681497,24682213-24682275,24683380-24684239,
24684399-24684772,24685932-24686112,24686201-24686220
Length = 958
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +2
Query: 314 IEKEDASESETEILDSQDGEDHSHVHFSVDTSYKVKCEKDEGASCYCSASHTENYCSTDE 493
I + E E +LD+QDG D + F D+ DEG YC +S E T+
Sbjct: 667 ISSQLLEEGENFVLDTQDGSDDDQIEFIPDSD-------DEGIE-YCFSSDQEFVPETEF 718
Query: 494 HDPTQIHGISNALQ 535
D ++ +Q
Sbjct: 719 QDCGEVEEKGGGIQ 732
>01_06_1610 -
38625427-38625726,38625814-38625885,38626001-38626117,
38626509-38626674,38626768-38626815,38626889-38626962,
38627126-38627243,38627332-38627420,38627512-38627687,
38627785-38627898,38627981-38628051,38628431-38628477,
38628581-38628721,38629095-38629136
Length = 524
Score = 30.3 bits (65), Expect = 3.5
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 1/140 (0%)
Frame = +2
Query: 284 VELDSVKTYYIEKEDASESETEILDSQDGEDHSHVHFSVDTSYKVKCEKDEGASCYCSAS 463
VE+D E+E + + T D++DG+D + S+ + + E + ++
Sbjct: 358 VEMDKYIDQNAEEESSDDDSTSEQDNEDGDDVAVKIGSLKIAEQDSAEVPDCTLASKDSN 417
Query: 464 HTENYCSTDEHDPTQIHGISNALQPS-DSGADLTYQDYHSDYISHDKLEQLDHDTEALIE 640
E + +E T G +N++ PS S D D D D D E
Sbjct: 418 EPETFAKENE-TSTSCSGENNSINPSPSSNGDAKEPTESQDNDDSDDDSSDDPDGEDDDA 476
Query: 641 NENYLSEDTWEKFWAIHGER 700
L++ A HG R
Sbjct: 477 LAKQLNKQRKRAIAAAHGRR 496
>12_01_0750 - 6754126-6755248,6755331-6755791
Length = 527
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 244 NLQSVTAESSLQEFLSTAVLA*QYFRISGKRELNAWSHTAHTIVDP 107
N+ +T ES++ E AV YF S RE++AW TA P
Sbjct: 267 NMTVLTYESNIWERRDFAVPYPSYFHPSSAREVSAWQATARAARRP 312
>07_03_0407 -
17791696-17791831,17792531-17792646,17794029-17794233,
17794691-17795034
Length = 266
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 505 SWIMLIS*TVVFSVRSATITAGAFVFLTLYFIRCIYREMYMGMIFSILGV 356
+W + VV S+ S T T G+ +F L+ R ++ +GM+F G+
Sbjct: 184 TWALEKKGPVVVSLFSPTQTVGSAIFSALFLGRVVHPVSMLGMVFLFSGL 233
>06_01_0061 + 527417-527856,527957-528017,528113-528685
Length = 357
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +2
Query: 680 WAIHGERLIWASWIKK-YSNYINPAFLNENNDLTMDENGVPTQHSEDIYKENIENTPGAD 856
W I+ +W I+ Y P + NN L G QH +D K T A
Sbjct: 171 WFINARVRLWKPMIEDMYKEETKPESSDGNNKLNPSAAGNKQQHRDDPKKNYTATTAEAS 230
Query: 857 DIRERKFHM 883
+++ +H+
Sbjct: 231 LVQQSSYHL 239
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 153 VSSMPGHTRHIQSLILDNDIELLDCPGLV 67
V+ +PG T+ Q + L I L+DCPG+V
Sbjct: 344 VAPIPGETKVWQYITLTKRIFLIDCPGVV 372
>02_01_0041 +
279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 29.5 bits (63), Expect = 6.1
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 362 QDGEDHSHVHFSVDTSYKVKCEKDEGASCYCSASHTENYCSTDEHDPTQIHGISNALQPS 541
QDG ++ V S +T+Y VK +D A A H + Q + SN++QP
Sbjct: 310 QDGANNGVVASSAETNYSVKQTEDLPAHNQV-AQHNSFSNNYSYQSQWQTNSFSNSMQPE 368
Query: 542 DSGADL 559
+ A L
Sbjct: 369 SATASL 374
>10_08_0351 -
17069974-17070232,17070470-17071751,17071908-17071969,
17072109-17072181,17072399-17072466,17073023-17073207,
17073311-17073452,17073665-17073720,17074003-17074056,
17074679-17074782,17075012-17075112,17075717-17075790,
17076482-17076560,17076668-17076744,17076875-17076931,
17077058-17077168,17077254-17077334
Length = 954
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 596 DKLEQLDHDTEALIENENYLSEDTWEKFWAIHG 694
D + Q D D + LIEN+ + + T++ W +HG
Sbjct: 667 DYMNQFDRDGDGLIENDGF-PDQTYDA-WTVHG 697
>07_03_0200 -
15016084-15016342,15016814-15016869,15016963-15017960,
15018707-15018768,15019242-15019274,15019697-15019881,
15020033-15020133,15020783-15020795,15021216-15021319,
15021593-15021693,15022773-15022849,15022965-15023021,
15023158-15023268,15023803-15023859
Length = 737
Score = 29.1 bits (62), Expect = 8.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 602 LEQLDHDTEALIENENYLSEDTWEKFWAIHG 694
+EQ DHD + +IEN+ + + T++ W + G
Sbjct: 483 MEQFDHDDDGMIENDGF-PDQTYDA-WTVRG 511
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 257 IISIIHLCSVELDSVKTYYIEKEDASESETEILDSQDGEDHSHVHFSVDTSYKVKCE 427
++ + + EL S+KT+ E+ D +S + L+S S VH+ + + V+ E
Sbjct: 3006 VMDSVSVSYAELRSIKTFRCEESDGVKSTKDYLESDCMIVPSDVHYELSSPRNVEVE 3062
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,356,577
Number of Sequences: 37544
Number of extensions: 579404
Number of successful extensions: 1498
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4073878200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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