Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H16
         (1283 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0533 + 4594169-4595065,4598375-4598983                           29   6.0  
04_04_0386 + 24865344-24865973,24866068-24866439                       29   6.0  

>05_01_0533 + 4594169-4595065,4598375-4598983
          Length = 501

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -2

Query: 523 TQTPSHAIRNHVGRNAICSNIVHRMLCTEVAKHILQYVMLVITIIVCILFVAAASPLT 350
           T   +H       R ++C  I  R L  E A H +Q   L +  +V +LF    S LT
Sbjct: 296 TYLKAHPHAGKEERRSLCRLIDARKLTAEAAAHAVQNERLPVRCVVQVLFSEHGSKLT 353


>04_04_0386 + 24865344-24865973,24866068-24866439
          Length = 333

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +2

Query: 437 FSTQHSMNNVRTDSVSAHVVPDGVAGGLRPLQSV 538
           F + HSMN+  + S +A VVPD  AGG  P+  V
Sbjct: 201 FYSDHSMNHSVSSSEAA-VVPDAAAGGGAPMPVV 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,077,887
Number of Sequences: 37544
Number of extensions: 332804
Number of successful extensions: 718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3992400636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)