Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H12
(1347 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 48 2e-05
05_04_0224 - 19198722-19198835,19198947-19199436,19200478-192006... 47 3e-05
01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320 39 0.008
04_03_0630 - 18182681-18182931,18183397-18183463,18184899-181849... 32 0.90
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 31 2.1
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 30 3.6
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 30 4.8
01_01_0434 - 3287323-3287710,3287736-3287890 30 4.8
11_06_0657 + 25938382-25938443,25938511-25938718,25939222-259392... 29 6.3
10_08_0048 - 14441540-14441620,14442044-14442111,14442275-144424... 29 8.4
04_03_0733 + 19116771-19116957,19117733-19117858,19117946-191180... 29 8.4
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 47.6 bits (108), Expect = 2e-05
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Frame = +1
Query: 337 NFLGSRPT--PFPYPPPQSNEPTKTLKSLVNIRKESLRFIRCPEPLSKLADNQIGDGVMK 510
NF PT P P PP ++ T+++ VN++KE+LR EP
Sbjct: 133 NFSYGPPTQPPAPAPPYVEHQKAVTIRNDVNLKKETLRV----EP--------------- 173
Query: 511 SPESNGKGTYYNIEFTFDCD-ARCAITVHYFCTEEVTPAGVVYYPRDPTMSSQTYHYKKG 687
E G+ + I FTFD A ++TV++F EE+ + ++ + T +K+G
Sbjct: 174 DDECPGR---FLITFTFDATVAGRSMTVYFFAKEELNCN--LTATKEDLLKPVTVTFKEG 228
Query: 688 ANQQFCQISHV-FDPSKYSEEDLLYNADKELIPIAIYCVV-------DEGQDEIRQ---S 834
Q+F Q S D S + + +L + ++ P+A+ EG+++ Q S
Sbjct: 229 LGQKFRQPSGTGIDFSLFEDAELFKEGEMDVYPLAVKAETTFSIGQFSEGEEQKSQTPNS 288
Query: 835 HTTIAVVEKHSDGTYVLKALKQKXLWMD 918
T AV E+ +G Y ++ +KQ LW++
Sbjct: 289 QITQAVFERKENGDYHVRVVKQ-ILWVN 315
Score = 31.1 bits (67), Expect = 2.1
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 909 VDGLCYLLQEIYGIENKNLDSKPXXXXXXXXXXXXCVICMCETRXXLILP-GXXCACA 1079
V+G Y LQEIYGI N CVIC+ E R +LP C C+
Sbjct: 314 VNGTRYELQEIYGIGN-----SVEGDTEGNDPGKECVICLSEPRDTTVLPCRHMCMCS 366
>05_04_0224 -
19198722-19198835,19198947-19199436,19200478-19200641,
19202534-19202632,19204069-19204175,19204278-19204401,
19205113-19205242,19205314-19205433,19205861-19206002,
19207243-19207326,19207651-19207742,19207855-19207944,
19208057-19208136,19208312-19208451,19208587-19209067
Length = 818
Score = 47.2 bits (107), Expect = 3e-05
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +1
Query: 547 IEFTFDCDARCAITVHYFCTEEVTPAGVVYYPRDPTMSSQTYHYKKGANQQFCQISHVFD 726
+ FTFD +IT++YF E YP T + ++KG Q+F Q S
Sbjct: 607 VAFTFDAVTDGSITIYYFGKEGKNCTFSSVYPELQTPTK--IPFQKGLAQKFVQTSGSGV 664
Query: 727 PSKYSEEDLLYNADKELIPIAIYCVVDEGQDEIRQSHT-----TIAVVEKHSDGTYVLKA 891
+ D L N E+ P+ +Y +E Q ++ T+AV+EKH + V K
Sbjct: 665 DLGFFSLDELSNPSGEVFPLVVYAEACPPPEESHQPNSTRAQITLAVIEKHHNDLRV-KV 723
Query: 892 LKQKXLWMD 918
+KQ LW D
Sbjct: 724 VKQ-MLWSD 731
Score = 36.3 bits (80), Expect = 0.055
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = +3
Query: 858 ETFRRNVCVESFKTKXVVDGLCYLLQEIYGIENKNLDSKPXXXXXXXXXXXXCVICMCET 1037
E ++ V+ K DG Y LQEIYGI N P CVIC+ E
Sbjct: 713 EKHHNDLRVKVVKQMLWSDGEKYELQEIYGIVNSTEADVP--DADDSDMGKECVICLTEP 770
Query: 1038 RXXLILP-GXXCACAXRGRTRWATGXKXPI 1124
R + P C C+ +T K PI
Sbjct: 771 RDTAVFPCRHLCMCSECAKTLRFQTDKCPI 800
>01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320
Length = 313
Score = 39.1 bits (87), Expect = 0.008
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 484 NQIGDGVMKSPESNGK-GTYYNIEFTFDCDARCAITVHYFCTEEVTPAGVVYYPRDPTMS 660
N GD + P+ + G + F+FD D +ITV +F E+ + ++ +
Sbjct: 66 NVKGDTLRLVPDDDDDDGRSLLLAFSFDADGPGSITVCFFAQEDKC---ALKTAKENLLQ 122
Query: 661 SQTYHYKKGANQQFCQIS-HVFDPSKYSEEDLLYNADKELIPIAIYCVVD-EGQDEIRQS 834
T +K+G Q+F Q S D S++ E +L + + P+A +D G E +
Sbjct: 123 PVTVPFKEGRGQEFKQPSGSGIDVSRFEESELTNVGEGGVFPVAFKVQMDVSGNQESEGA 182
Query: 835 HTT 843
H T
Sbjct: 183 HET 185
Score = 33.5 bits (73), Expect = 0.39
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 909 VDGLCYLLQEIYGIENKNLDSKPXXXXXXXXXXXXCVICMCETRXXLILP-GXXCAC 1076
V+G+ Y+LQEIYGI N D CV+C+ E R +LP C C
Sbjct: 216 VNGIRYVLQEIYGIGN-TADKN----AHEDDSGKECVVCLSEPRDTAVLPCRHMCLC 267
>04_03_0630 -
18182681-18182931,18183397-18183463,18184899-18184964,
18185057-18185178,18185263-18185425,18186082-18186329,
18186418-18186751,18186857-18187000,18187079-18187144
Length = 486
Score = 32.3 bits (70), Expect = 0.90
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 289 DTPQPEAYLFGENADLNFLGSRPTPFPYPPPQSNEPTKTLKSLVNIRKE 435
+TP PE N + + P P P P PQ P K+ S+V + KE
Sbjct: 222 ETPIPEVIDEVPNNVAVAMPTPPAPAPAPVPQEEAPKKSYASIVKVMKE 270
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 31.1 bits (67), Expect = 2.1
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 909 VDGLCYLLQEIYGIENKNLDSKPXXXXXXXXXXXXCVICMCETRXXLILP-GXXCACA 1079
V+G Y LQEIYGI N CVIC+ E R +LP C C+
Sbjct: 309 VNGTRYELQEIYGIGN-----SVEGDADANDPGKECVICLSEPRDTTVLPCRHMCMCS 361
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 232 PPRSGNYFGSHFIMGGERFDTPQPEAYLFGENADLNFLGSRPTPFPYPPPQSNEP 396
PP++G G F G PQP + N G +PPPQ N+P
Sbjct: 20 PPQAGGGGGGEFYRG----PPPQPPMRQLSAASSTNIPGDYAAHQGHPPPQQNQP 70
>08_02_0823 +
21557111-21557292,21557391-21557473,21557722-21557810,
21557985-21558058,21558264-21558314,21558406-21558482,
21560206-21560900
Length = 416
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 355 PTPFPYPPPQSNEPTKTLKSLVNIRKESLRFIRCPEP 465
P+P P PPPQ +PT N+ S+ RC P
Sbjct: 340 PSPLPSPPPQ-QQPTVPKDDQYNVDMSSVAAARCSFP 375
>01_01_0434 - 3287323-3287710,3287736-3287890
Length = 180
Score = 29.9 bits (64), Expect = 4.8
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 313 LFGENADLNFLGSRPTPFPYPPPQS-NEPTKTLKSLVNIRKESLRFIRCPEPLSK 474
L A N+ + P+P P PPPQ P + K LV + + +PLSK
Sbjct: 15 LLAAGATANYGYTTPSPSPPPPPQQYTPPAHSDKLLVRAACKETHSLEDAKPLSK 69
>11_06_0657 +
25938382-25938443,25938511-25938718,25939222-25939268,
25939473-25939805,25940529-25940613,25940689-25940884,
25941012-25941182,25941261-25941318,25941429-25941657,
25942296-25943183
Length = 758
Score = 29.5 bits (63), Expect = 6.3
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +1
Query: 193 EDADIISNHAYKYPPRSGNYFGSHFIMG----GERFDTPQPEAYLFGENADLNFLGSRPT 360
+D D+I NHA K PR NY M E F T YL G +P+
Sbjct: 253 QDWDMIINHALKCKPRPANYSSYTEEMNVHQEHESFHTSNGNCYLKGS------CSMQPS 306
Query: 361 PFPYPPPQSNEPTKTLKSLVNIRKESLRFIR 453
P P P S T+ + ++ ++ + RF++
Sbjct: 307 PAPANLPVSENHTEQIDIQLS-KQHASRFLQ 336
>10_08_0048 - 14441540-14441620,14442044-14442111,14442275-14442493,
14442506-14444508,14447541-14448410,14448533-14448576,
14449920-14450093
Length = 1152
Score = 29.1 bits (62), Expect = 8.4
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +1
Query: 652 TMSSQTYHYKKGANQQFCQISHVFDPSKYSEEDLLYNADKELIPIAIYCVVDEGQDEIRQ 831
T ++QT+H +++ ++ K N D+EL+ +YC V G +R
Sbjct: 1013 TPNAQTFHSLVTGYAAVGEVTDLWGEMKVLATSSSMNFDQELLDSLLYCFV-RGGFFLR- 1070
Query: 832 SHTTIAVVEKHSDGTYVLKALKQKXLWMDF 921
+ V+E G + K K LW+ +
Sbjct: 1071 ---AMEVIEMMEKGKMFIDKYKYKSLWLKY 1097
>04_03_0733 +
19116771-19116957,19117733-19117858,19117946-19118061,
19118395-19118483,19118692-19118743,19119361-19119829,
19120985-19121367,19121450-19122132,19122561-19123152,
19123255-19123638,19124106-19124114
Length = 1029
Score = 29.1 bits (62), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 486 PDW*WCYEITRIKWKGDIL 542
P+W +CYEIT++ GD L
Sbjct: 464 PEWTYCYEITKVIITGDFL 482
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,045,948
Number of Sequences: 37544
Number of extensions: 641519
Number of successful extensions: 1916
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1894
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4236833328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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