Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H12
(1347 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 136 3e-32
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 33 0.35
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 33 0.35
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 33 0.61
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 29 5.7
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 29 5.7
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 29 5.7
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 136 bits (330), Expect = 3e-32
Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 4/225 (1%)
Frame = +1
Query: 241 SGNYFGSHFIMGGERFDTPQPEAYLFGENADLNFLGSRPTPFPYPP-PQSNEPTKTLKSL 417
+G+YFGSHF+M G +F+ +PEAYLFGEN+DL+ LGSR FPYPP P N+ + L L
Sbjct: 35 AGSYFGSHFLMCGCKFEMARPEAYLFGENSDLDQLGSRALSFPYPPGPLGNDEIRPLNLL 94
Query: 418 VNIRKESLRFIRCPEPLSKLADNQIGDGVMKSPESNGKGTYYNIEFTFDCDARCAITVHY 597
VNIRKES++F R + +L N Y + F FDCD+ C I VH+
Sbjct: 95 VNIRKESVKFQRVKKDNGELNAN-----------------LYQLTFVFDCDSACVIQVHF 137
Query: 598 FCTEEVTPAGVVY-YPRDPTMSSQTYHYKKGANQQFCQISHVFDPSKYSEEDLLYNADKE 774
E + + Y SS+T+H++ GA+Q F +VFD S++ DL Y++
Sbjct: 138 HAKEMYHDGEIQFAYRNRRPQSSETFHFETGADQVFG--GYVFDTSRWDTNDLSYSSGL- 194
Query: 775 LIPIAIYCVVDEGQDEIRQSHTTIAVVEKHSDGT--YVLKALKQK 903
P I + G E Q TT+ +E +D + VLK L+QK
Sbjct: 195 YYPFVI-SITTSGV-ESTQMQTTMCTIETGNDSSKALVLKPLRQK 237
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 882 VESFKTKXVVDGLCYLLQEIYGIENKNLDSKPXXXXXXXXXXXXCVICMCETRXXLILP- 1058
++ + K DG+ YLLQEI+GIENK++++ C+IC+ + R +ILP
Sbjct: 231 LKPLRQKIACDGVTYLLQEIFGIENKSVET------MDDDSGLECIICLSDIRDTVILPC 284
Query: 1059 GXXCACA 1079
C C+
Sbjct: 285 RHLCVCS 291
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.35
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +1
Query: 358 TPFPYPPPQSNEPTKTLKSLVNIRKESLRFIRCPEPLSKLADNQIGDGVMKSPESNGKGT 537
T F PPP+S + +L+ + I S + + KL++N+ G+ GT
Sbjct: 126 TAFSSPPPKSMKTPDSLRKSIRISSPSPFKVTFSKTPLKLSNNENVTGI----HIGRSGT 181
Query: 538 YYNIEFTFDCDARCAI 585
YYN + T RC +
Sbjct: 182 YYNKQVTGSASKRCLL 197
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.35
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +1
Query: 358 TPFPYPPPQSNEPTKTLKSLVNIRKESLRFIRCPEPLSKLADNQIGDGVMKSPESNGKGT 537
T F PPP+S + +L+ + I S + + KL++N+ G+ GT
Sbjct: 126 TAFSSPPPKSMKTPDSLRKSIRISSPSPFKVTFSKTPLKLSNNENVTGI----HIGRSGT 181
Query: 538 YYNIEFTFDCDARCAI 585
YYN + T RC +
Sbjct: 182 YYNKQVTGSASKRCLL 197
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 32.7 bits (71), Expect = 0.61
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 628 VVYYPRDPTMSSQTYHYKKGANQQFCQISHVFDPSKYSEE-DLLYNADKELIPIA-IYCV 801
V + P +P S+Q +KK Q + H YS + D +++ E + + I +
Sbjct: 67 VAHKPANPENSNQKRQFKKILGQDGILVKHQEGTKWYSYQIDHVHDEKTEKMNASEIQKL 126
Query: 802 VDEGQDEIRQSHTTIAVVEKHSDGT 876
++EG+DE+ Q + EK +G+
Sbjct: 127 LEEGKDEMAQDAALLQTKEKQDNGS 151
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 361 PFPYPPPQSNEPTKTLKSLVN 423
PFP PPPQ N K LKS++N
Sbjct: 645 PFP-PPPQQNTKPKLLKSVLN 664
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 361 PFPYPPPQSNEPTKTLKSLVN 423
PFP PPPQ N K LKS++N
Sbjct: 650 PFP-PPPQQNTKPKLLKSVLN 669
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 361 PFPYPPPQSNEPTKTLKSLVN 423
PFP PPPQ N K LKS++N
Sbjct: 660 PFP-PPPQQNTKPKLLKSVLN 679
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 361 PFPYPPPQSNEPTKTLKSLVN 423
PFP PPPQ N K LKS++N
Sbjct: 511 PFP-PPPQQNTKPKLLKSVLN 530
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 751 LLYNADKELIPIAIYCVVDEGQDEIRQSHTTIAVVEKHSDGTYVLKALKQKXLW 912
LLY + E PI + ++ IR HTT AV D +V K LW
Sbjct: 1266 LLYRENCEFKPIFLKLPLNVRNIPIRPRHTTTAVTFASHDTVFVAGVRKHLFLW 1319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,562,451
Number of Sequences: 27780
Number of extensions: 554171
Number of successful extensions: 1537
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3788030792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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