Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H10
         (1285 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   1.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   8.3  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect(2) = 1.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 893 PPPPPPXP 870
           PPPPPP P
Sbjct: 784 PPPPPPPP 791



 Score = 21.4 bits (43), Expect(2) = 1.4
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -3

Query: 935 PXPXGXXDXXXXXKPPPPPP 876
           P      D      PPPPPP
Sbjct: 771 PSRSAFADGIGSPPPPPPPP 790


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 346 LPFFQQEGSYLQGRHHCHY*NYR 278
           L F++ EGS L  RH+C    YR
Sbjct: 92  LQFYRMEGSDLTLRHYCSETKYR 114


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 346 LPFFQQEGSYLQGRHHCHY*NYR 278
           L F++ EGS L  RH+C    YR
Sbjct: 92  LQFYRMEGSDLTLRHYCSEAIYR 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,266
Number of Sequences: 2352
Number of extensions: 12158
Number of successful extensions: 134
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147557667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)