Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H10
         (1285 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023261-1|AAY55677.1|  110|Drosophila melanogaster IP02710p pro...    95   2e-19
AE014134-1428|AAF52619.1|  110|Drosophila melanogaster CG8396-PA...    95   2e-19
U18971-1|AAC46989.1|   98|Drosophila melanogaster p31A protein.        71   5e-12
AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB...    25   3.3  
AY069509-1|AAL39654.1|  481|Drosophila melanogaster LD22957p pro...    25   4.2  
AF260583-1|AAG13285.1|  481|Drosophila melanogaster cyclin D pro...    25   4.2  
AE014298-2283|AAF48537.1|  481|Drosophila melanogaster CG9096-PC...    25   4.2  
AE014298-2282|AAN09375.1|  481|Drosophila melanogaster CG9096-PB...    25   4.2  
AE014298-2281|AAN09374.1|  481|Drosophila melanogaster CG9096-PA...    25   4.2  
U41808-1|AAC47016.1|  452|Drosophila melanogaster Cyclin D protein.    25   4.2  
AM412966-1|CAL85589.1|  265|Drosophila melanogaster Fst protein.       25   4.5  
AM412964-1|CAL85587.1|  266|Drosophila melanogaster Fst protein.       25   4.5  
AM412963-1|CAL85586.1|  266|Drosophila melanogaster Fst protein.       25   4.5  
AE014298-2877|AAF48974.1|  348|Drosophila melanogaster CG14218-P...    25   5.6  

>BT023261-1|AAY55677.1|  110|Drosophila melanogaster IP02710p
           protein.
          Length = 110

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
 Frame = +1

Query: 307 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 462
           GP+DR  PA KKAK +D  N            +W L+G + +++ EF+G+  VDIREFY+
Sbjct: 16  GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75

Query: 463 KNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSS 567
           K G++LPGKKGISL+  QW+KLL V EEV   + +
Sbjct: 76  KGGQILPGKKGISLSLIQWKKLLEVAEEVTRAIEN 110


>AE014134-1428|AAF52619.1|  110|Drosophila melanogaster CG8396-PA
           protein.
          Length = 110

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
 Frame = +1

Query: 307 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 462
           GP+DR  PA KKAK +D  N            +W L+G + +++ EF+G+  VDIREFY+
Sbjct: 16  GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75

Query: 463 KNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSS 567
           K G++LPGKKGISL+  QW+KLL V EEV   + +
Sbjct: 76  KGGQILPGKKGISLSLIQWKKLLEVAEEVTRAIEN 110


>U18971-1|AAC46989.1|   98|Drosophila melanogaster p31A protein.
          Length = 98

 Score = 70.5 bits (165), Expect = 5e-12
 Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
 Frame = +1

Query: 307 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 462
           GP+DR  PA KKAK +D  N            +W L+G + +++ EF+G+  VDIREFY+
Sbjct: 16  GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75

Query: 463 KNGELLPGKKG 495
           K G++LPGKKG
Sbjct: 76  KGGQILPGKKG 86


>AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB,
           isoform B protein.
          Length = 409

 Score = 25.4 bits (53), Expect(2) = 3.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 893 PPPPPPXPXTXXXS 852
           PPPPPP P T   S
Sbjct: 234 PPPPPPPPPTLSPS 247



 Score = 24.2 bits (50), Expect(2) = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 227 RPPPPPPPP 235


>AY069509-1|AAL39654.1|  481|Drosophila melanogaster LD22957p
           protein.
          Length = 481

 Score = 25.4 bits (53), Expect(2) = 4.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 893 PPPPPPXPXTXXXS 852
           PPPPPP P T   S
Sbjct: 93  PPPPPPPPPTATQS 106



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 88  EPPPPPPPP 96


>AF260583-1|AAG13285.1|  481|Drosophila melanogaster cyclin D
           protein.
          Length = 481

 Score = 25.4 bits (53), Expect(2) = 4.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 893 PPPPPPXPXTXXXS 852
           PPPPPP P T   S
Sbjct: 93  PPPPPPPPPTATQS 106



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 88  EPPPPPPPP 96


>AE014298-2283|AAF48537.1|  481|Drosophila melanogaster CG9096-PC,
           isoform C protein.
          Length = 481

 Score = 25.4 bits (53), Expect(2) = 4.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 893 PPPPPPXPXTXXXS 852
           PPPPPP P T   S
Sbjct: 93  PPPPPPPPPTATQS 106



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 88  EPPPPPPPP 96


>AE014298-2282|AAN09375.1|  481|Drosophila melanogaster CG9096-PB,
           isoform B protein.
          Length = 481

 Score = 25.4 bits (53), Expect(2) = 4.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 893 PPPPPPXPXTXXXS 852
           PPPPPP P T   S
Sbjct: 93  PPPPPPPPPTATQS 106



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 88  EPPPPPPPP 96


>AE014298-2281|AAN09374.1|  481|Drosophila melanogaster CG9096-PA,
           isoform A protein.
          Length = 481

 Score = 25.4 bits (53), Expect(2) = 4.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 893 PPPPPPXPXTXXXS 852
           PPPPPP P T   S
Sbjct: 93  PPPPPPPPPTATQS 106



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 88  EPPPPPPPP 96


>U41808-1|AAC47016.1|  452|Drosophila melanogaster Cyclin D protein.
          Length = 452

 Score = 25.4 bits (53), Expect(2) = 4.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 893 PPPPPPXPXTXXXS 852
           PPPPPP P T   S
Sbjct: 64  PPPPPPPPPTATQS 77



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 59  EPPPPPPPP 67


>AM412966-1|CAL85589.1|  265|Drosophila melanogaster Fst protein.
          Length = 265

 Score = 25.0 bits (52), Expect(2) = 4.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 893 PPPPPPXPXT 864
           PPPPPP P T
Sbjct: 97  PPPPPPPPPT 106



 Score = 24.2 bits (50), Expect(2) = 4.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 95  RPPPPPPPP 103


>AM412964-1|CAL85587.1|  266|Drosophila melanogaster Fst protein.
          Length = 266

 Score = 25.0 bits (52), Expect(2) = 4.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 893 PPPPPPXPXT 864
           PPPPPP P T
Sbjct: 97  PPPPPPPPPT 106



 Score = 24.2 bits (50), Expect(2) = 4.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 95  RPPPPPPPP 103


>AM412963-1|CAL85586.1|  266|Drosophila melanogaster Fst protein.
          Length = 266

 Score = 25.0 bits (52), Expect(2) = 4.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 893 PPPPPPXPXT 864
           PPPPPP P T
Sbjct: 97  PPPPPPPPPT 106



 Score = 24.2 bits (50), Expect(2) = 4.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 95  RPPPPPPPP 103


>AE014298-2877|AAF48974.1|  348|Drosophila melanogaster CG14218-PA
           protein.
          Length = 348

 Score = 25.0 bits (52), Expect(2) = 5.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 893 PPPPPPXPXT 864
           PPPPPP P T
Sbjct: 172 PPPPPPPPPT 181



 Score = 23.8 bits (49), Expect(2) = 5.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 896 KPPPPPPXP 870
           +PPPPPP P
Sbjct: 169 EPPPPPPPP 177


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,564,340
Number of Sequences: 53049
Number of extensions: 660726
Number of successful extensions: 6853
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5869
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6926855700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)