Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H10
(1285 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81122-1|CAB03353.1| 124|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 26 2.0
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 25 3.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 7.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 7.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 7.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 7.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 7.1
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 29 9.4
AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical ... 29 9.4
>Z81122-1|CAB03353.1| 124|Caenorhabditis elegans Hypothetical
protein T13F2.2 protein.
Length = 124
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Frame = +1
Query: 331 AEKKAKMADRTNDKEPTWVLQ--GKKLLKVREFKGKVYVDIREFY--EKNGELLPGKKGI 498
A+ + +++ R D + + + + V +FKGK YV+IRE+Y + +++P +KGI
Sbjct: 44 AKNEEEVSGRLKDSDGNEMFEIGNLRYATVSKFKGKEYVNIREYYIDRDSQKMMPSRKGI 103
Query: 499 SLTPEQWRKLLSVGEEVNE 555
SL+ QW L + E+++
Sbjct: 104 SLSKAQWANLKDLIPEIDK 122
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.8 bits (54), Expect(2) = 2.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -3
Query: 947 PKXXPXPXGXXDXXXXXKPPPPPP 876
P P P D PPPPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 23.4 bits (48), Expect(2) = 2.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 893 PPPPPPXP 870
PPPPPP P
Sbjct: 1390 PPPPPPLP 1397
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 25.0 bits (52), Expect(2) = 3.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 974 GSXXGXGXXPKXXPXPXGXXDXXXXXKPPPPPP 876
G+ G G P P G PPPPPP
Sbjct: 509 GNNNGNGR-PMKPPSSSGSGSNRRSGPPPPPPP 540
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 893 PPPPPPXP 870
PPPPPP P
Sbjct: 534 PPPPPPPP 541
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -3
Query: 995 PXXXXGXGSXXGXGXXPKXXPXPXGXXDXXXXXKPPPPPPXP 870
P G P P P G PPPPPP P
Sbjct: 616 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -3
Query: 995 PXXXXGXGSXXGXGXXPKXXPXPXGXXDXXXXXKPPPPPPXP 870
P G P P P G PPPPPP P
Sbjct: 442 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 7.1
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 2/79 (2%)
Frame = -3
Query: 1106 PPTXXXGXAXXAXXXSFSXXXPXXXXXXPPXXXX--TXXPXXXXGXGSXXGXGXXPKXXP 933
PPT A S P PP T P G P P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 932 XPXGXXDXXXXXKPPPPPP 876
P G PPPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 7.1
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 2/79 (2%)
Frame = -3
Query: 1106 PPTXXXGXAXXAXXXSFSXXXPXXXXXXPPXXXX--TXXPXXXXGXGSXXGXGXXPKXXP 933
PPT A S P PP T P G P P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 932 XPXGXXDXXXXXKPPPPPP 876
P G PPPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 7.1
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 2/79 (2%)
Frame = -3
Query: 1106 PPTXXXGXAXXAXXXSFSXXXPXXXXXXPPXXXX--TXXPXXXXGXGSXXGXGXXPKXXP 933
PPT A S P PP T P G P P
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Query: 932 XPXGXXDXXXXXKPPPPPP 876
P G PPPPPP
Sbjct: 330 PPGGLPPISGGPPPPPPPP 348
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 131 FFFSLNILILPXWYCRLSLVRL-YPIQNSIVCN 226
F+F+ ILILP C + L+ L YP + ++C+
Sbjct: 113 FYFNYCILILPLLLCLIRLIILIYPKDHPMICS 145
>AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical
protein B0546.3 protein.
Length = 468
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 522 SPLFWSETYPFFTW*KFTILFIKFSYVY 439
+P+FW + YPFF +F F F V+
Sbjct: 373 TPIFWEKIYPFFRIFRFFSNFYTFPVVF 400
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,957,071
Number of Sequences: 27780
Number of extensions: 343033
Number of successful extensions: 2053
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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