Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H08
         (1279 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   2.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   6.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   6.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 217 YLALLF*Q*PSYFGGFSLEGILFATQYC 300
           Y++LL    P+YFG    + +L   +YC
Sbjct: 295 YVSLLLGPHPTYFGKTGRKTVLKTNKYC 322


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 14/67 (20%), Positives = 31/67 (46%)
 Frame = +3

Query: 651 GSQVIKGLLEKEINLVRVTKSNQLQSVDPSEGNTGSFLGKDGKDFEFSHIRNKVEFAECS 830
           G +++K   + +  + R  KS    +   S+  + SFL K   + +   +R   E ++C 
Sbjct: 369 GMKIVKKRRKDKREITR--KSTSSSTHTSSQQTSDSFLSKRNSEKKCGSLREIKEVSDCD 426

Query: 831 ANTNDDE 851
           ++ +  E
Sbjct: 427 SSESRKE 433


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 84   LIF*STYYFSDLVCVKRKNSTMESEVVK--EKIHTEPILNDPRYITLLSLIVLAV 242
            LIF ST Y +++VC+     +   EV K  E IH +   ND   I  + +  L +
Sbjct: 911  LIFVSTLYTANVVCICHVCYSTIQEVSKSGELIH-KIATNDHEIIDKIEMFSLQI 964


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 345 LAYSQYRQTFTSMKENIEEYI 407
           LAY + RQ F + K+NI E+I
Sbjct: 284 LAY-KIRQVFPNEKKNISEFI 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,607
Number of Sequences: 336
Number of extensions: 5366
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37610526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)