Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H08
(1279 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 110 2e-24
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 80 4e-15
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 62 9e-10
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 60 5e-09
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 59 8e-09
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 58 1e-08
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 58 1e-08
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 58 1e-08
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 56 5e-08
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 56 8e-08
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 54 2e-07
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 51 2e-06
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 43 6e-04
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 42 0.001
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 41 0.002
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 40 0.003
08_01_0414 + 3684491-3684589,3684770-3684838,3685004-3685033,368... 31 1.9
05_06_0269 - 26818182-26820266 31 2.6
03_02_0640 - 10058828-10058971,10059066-10059201,10059512-100595... 31 2.6
12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104 29 7.9
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 29 7.9
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 110 bits (265), Expect = 2e-24
Identities = 74/224 (33%), Positives = 118/224 (52%), Gaps = 9/224 (4%)
Frame = +3
Query: 201 PRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAY-SQYRQTFT 377
P + + +V L+ + + + N+++L GLS SGKT+LF +L S ++ T T
Sbjct: 24 PEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGLSGSGKTILFYQLRDGSTHQGTVT 83
Query: 378 SMKENIEEYITSN--------KTLKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQ 533
SM++N + ++ + K + VVD+PG RL+ K E +A GIV+V+D+ +
Sbjct: 84 SMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKPKLDEVLPQAA-GIVYVVDAQDFL 142
Query: 534 KEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKS 713
+ AEYLY IL + P+LI CNK D+ A + IK LEKE+N +R ++
Sbjct: 143 STMHAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTAHSKEFIKKQLEKELNKLRESR- 201
Query: 714 NQLQSVDPSEGNTGSFLGKDGKDFEFSHIRNKVEFAECSANTND 845
N + S D ++ LG G+ F FS +NKV E + T +
Sbjct: 202 NAISSADITDEVK---LGNPGEAFNFSQCQNKVTVTEGAGLTGN 242
>06_03_0025 - 15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 79.8 bits (188), Expect = 4e-15
Identities = 52/143 (36%), Positives = 77/143 (53%)
Frame = +3
Query: 417 KTLKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 596
K + VVD+PG L+ K E +A GIVF +D+ + ++ VAEYLY IL +
Sbjct: 622 KPVHVVDVPGHAGLKPKLDEVLPQAA-GIVFAVDAQDFLSTMQVVAEYLYDILTKATVVK 680
Query: 597 NTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKSNQLQSVDPSEGNTGSFLGKDG 776
+LI CNK D+ A + IK LEKEIN +R ++ + + S D ++ LG G
Sbjct: 681 KRIHVLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESRKD-ISSADTTDEVK---LGNPG 736
Query: 777 KDFEFSHIRNKVEFAECSANTND 845
+ F FS +N+V AE + T +
Sbjct: 737 ETFYFSQCQNRVTVAEGAGLTGN 759
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 62.1 bits (144), Expect = 9e-10
Identities = 34/114 (29%), Positives = 66/114 (57%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKVVDLPGQERLRNKFF 473
V+++GL +GKT + RL + T ++ N+E+ N V D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 474 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 635
+ + S++ +++V+DS++ ++ I D + TI+ DP++ + +L+ NKQD
Sbjct: 79 KMYLSNSDALIYVVDSLD-RERIIDARQEFQTIIKDPLMANSI--ILVFANKQD 129
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 59.7 bits (138), Expect = 5e-09
Identities = 38/135 (28%), Positives = 70/135 (51%)
Frame = +3
Query: 261 IFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKVVDL 440
+F T VL++GL +GKT + RL + + ++ N+E+ N V D+
Sbjct: 8 LFDSFCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAFTVWDV 67
Query: 441 PGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 620
GQ++LR + Q+ +A +++V+DS++ ++ I E I+ DP++ + +L+L
Sbjct: 68 GGQDKLR-PLWRQYFRNADALIYVVDSMD-RERIGVAKEEFQAIIRDPLMLNSV--ILLL 123
Query: 621 CNKQDQPLAKGSQVI 665
NKQD A S +
Sbjct: 124 ANKQDLKGAMSSSEV 138
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 58.8 bits (136), Expect = 8e-09
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +3
Query: 246 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 422
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 423 LKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 602
V D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNEDELR--D 118
Query: 603 TPLLILCNKQDQPLAKGSQVI 665
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 58.4 bits (135), Expect = 1e-08
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +3
Query: 246 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 422
L F +FSR ++ + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 423 LKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 602
V D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 603 TPLLILCNKQDQPLAKGSQVI 665
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 58.0 bits (134), Expect = 1e-08
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = +3
Query: 246 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 422
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 126 LAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 185
Query: 423 LKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 602
V D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 186 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 241
Query: 603 TPLLILCNKQDQPLAKGSQVI 665
LL+ NKQD P A + I
Sbjct: 242 AVLLVFANKQDLPNAMNAAEI 262
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 58.0 bits (134), Expect = 1e-08
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = +3
Query: 246 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 422
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 423 LKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 602
V D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 603 TPLLILCNKQDQPLAKGSQVI 665
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 56.4 bits (130), Expect = 5e-08
Identities = 32/114 (28%), Positives = 65/114 (57%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKVVDLPGQERLRNKFF 473
V+++GL +GKT + +L + T ++ N+E+ N V D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR-PLW 78
Query: 474 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 635
+ ++ G+++V+DS++ ++ + AE+ I+ DP++ + +L+ NKQD
Sbjct: 79 RHYFNNTDGLIYVVDSLDRERIGKAKAEF-QAIVNDPLMLNSV--ILVFANKQD 129
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 55.6 bits (128), Expect = 8e-08
Identities = 33/114 (28%), Positives = 63/114 (55%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKVVDLPGQERLRNKFF 473
V+++GL +GKT + +L + T ++ N+E+ N V D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 474 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 635
+ ++ +++V+DS++ ++ R AE+ I+ DP + + LL+ NKQD
Sbjct: 79 RHYFNNTDALIYVVDSLDRERIGRARAEF-QAIINDPFMLNSV--LLVFANKQD 129
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 54.0 bits (124), Expect = 2e-07
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Frame = +3
Query: 246 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 422
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 423 LKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCD----PII 590
V D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L +
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNELQNWKKD 120
Query: 591 QGNTTPLLILCNKQDQPLAKGSQVI 665
+ LL+ NKQD P A + I
Sbjct: 121 ELRDAVLLVFANKQDLPNAMNAAEI 145
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKVVDLPGQERLRNKFF 473
+L++GL +SGKT + +++ ++ NI+ +L + D+ GQ+ +R+ ++
Sbjct: 19 ILMVGLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGGQKTIRS-YW 77
Query: 474 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD-QPLAK 650
+ G+V+V+DS +I++ + D L+ +L + + G LL+ NKQD Q K
Sbjct: 78 RNYFEQTDGLVWVVDSSDIRR-LDDCRAELHNLLKEERLAG--ASLLVFANKQDIQGALK 134
Query: 651 GSQVIK 668
S++ K
Sbjct: 135 PSEIAK 140
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 42.7 bits (96), Expect = 6e-04
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLF--VRLAYSQ-----YRQTFTSMKENIEEYITSNKTLKVVDLPGQE 452
V+++G+ +GKT L V+ Y + + + ++ NI +N L DL GQ
Sbjct: 153 VVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLVFWDLGGQP 212
Query: 453 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 632
LR +E++ A +++VIDS D L +L +QG PLLI NKQ
Sbjct: 213 GLRT-IWEKYYEEAHAVIYVIDSA-AASSFEDAKSALEKVLHHEDLQG--VPLLIFANKQ 268
Query: 633 DQPLA 647
+ P A
Sbjct: 269 ELPAA 273
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/125 (24%), Positives = 58/125 (46%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKVVDLPGQERLRNKFF 473
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 474 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKG 653
+ + + +V+++D+ + ++ + + L +L D + T P LIL NK D P A
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFSESKKELDALLSDDSLA--TVPFLILGNKIDIPYAAS 138
Query: 654 SQVIK 668
+ ++
Sbjct: 139 EEELR 143
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 41.1 bits (92), Expect = 0.002
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLFVRLAYSQYR-------QTFTSMKENIEEYITSNKTLKVVDLPGQE 452
VL++G+ +GKT L ++ + + ++ NI +N L DL GQ
Sbjct: 20 VLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIEDANAKLVFWDLGGQV 79
Query: 453 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 632
LR +E++ A I++VID+ D L +L ++G PLLI NKQ
Sbjct: 80 GLRT-IWEKYYQEAHAIIYVIDAA-AASSFEDAKSALEKVLRHEDLKG--APLLIFANKQ 135
Query: 633 DQP 641
D P
Sbjct: 136 DLP 138
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 40.3 bits (90), Expect = 0.003
Identities = 29/125 (23%), Positives = 57/125 (45%)
Frame = +3
Query: 294 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKVVDLPGQERLRNKFF 473
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 474 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKG 653
+ + + +V+++D+ + ++ + + L +L D + P LIL NK D P A
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFAESKKELDALLSDDSLA--AVPFLILGNKIDIPYAAS 138
Query: 654 SQVIK 668
+ ++
Sbjct: 139 EEELR 143
>08_01_0414 +
3684491-3684589,3684770-3684838,3685004-3685033,
3685540-3685596,3685884-3685954,3686185-3686266,
3686470-3686559,3686647-3686685
Length = 178
Score = 31.1 bits (67), Expect = 1.9
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Frame = +3
Query: 351 YSQYRQTFTSMKENIE--EYITSNKTLKVVDLPGQERLRNKFFEQHKSSAKGIVFVIDSI 524
Y + S+ NIE E + L ++DL + + +Q K V D
Sbjct: 51 YQMFIYVIKSLHSNIELLELTNFSMCLTMIDLCFEVAAALEKIDQFVEEQKLDVLSSDKT 110
Query: 525 NIQ-------KEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 680
NI+ K +D EYL +++ + + N I K+D LA G QV++ L++
Sbjct: 111 NIEDTKQMISKAKKDEVEYLKSLIEEVEEKNNAMKARIELLKKDDDLAAGKQVLEKLMQ 169
>05_06_0269 - 26818182-26820266
Length = 694
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 901 LKLSLLFFCTTYYTQHWF*PQYTMVSFGYLKMLIRHIRK*FXFYV 1035
LKL+ F+C Y QHW+ Q + SF +++I ++ + Y+
Sbjct: 394 LKLASCFWCKDYVDQHWYVNQCSS-SFAITELVIEQVKAGWKNYI 437
>03_02_0640 -
10058828-10058971,10059066-10059201,10059512-10059590,
10060861-10060927,10061014-10061100,10061474-10061567,
10061663-10061749,10062267-10062328,10062485-10062584,
10062729-10062827,10062969-10063033,10063617-10063694,
10063787-10063873,10064383-10064466,10064860-10064955,
10065045-10065122,10066049-10066139,10066224-10066315,
10066433-10066560,10067421-10067495,10067670-10067850
Length = 669
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 21 ESFKIPLIHYNFXTLE*YIHCLIF*STYYFS 113
+ F IPL+ N L Y HCL F S YFS
Sbjct: 217 DEFIIPLVQGNIQNLR-YFHCLFFYSYLYFS 246
>12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104
Length = 744
Score = 29.1 bits (62), Expect = 7.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = -1
Query: 589 MIGSHKIVYRYSATSLISFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTTFNVLLE 410
+IG +K + T S+C I S ++ P A + CC + P T + + E
Sbjct: 149 LIGGYKGTVSHYVTGCYSYCESINSTSDGAPCAGMGCC------EAAIPTDLTAWGAMFE 202
Query: 409 VIYSSIFSF 383
+ S ++SF
Sbjct: 203 MNQSKVWSF 211
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 29.1 bits (62), Expect = 7.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Frame = +3
Query: 675 LEKEINLVRVTKSNQLQSVDPSEGNTGSFLG--KDGKDFEF-------SHIRNKVEFAEC 827
+ KE+ +++SN L + P + N GS KDG+D + +H +F C
Sbjct: 685 ISKEVGRSLMSQSNILSTATPVKANNGSVQATLKDGQDSKMAVLSQTNAHQVMDNQFTLC 744
Query: 828 SANTND 845
SAN N+
Sbjct: 745 SANNNE 750
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,010,915
Number of Sequences: 37544
Number of extensions: 504133
Number of successful extensions: 1272
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -