Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H07
         (1333 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = -2

Query: 645 PXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGF 544
           P PPP    P    GG   G     P  P   GF
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGF 619


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +2

Query: 968  PPGXXSXXGGGXPPXGGGXKNPPXXXXGG 1054
            P       GGG P  GGG    P    GG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 944  GXGGXFXXPPGXXSXXGGGXPPXGGG 1021
            G GG     PG      GG  P GGG
Sbjct: 203  GGGGSGGGAPGGGGGSSGGPGPGGGG 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.152    0.519 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,399
Number of Sequences: 2352
Number of extensions: 10548
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 152804520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)