Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_H07
(1333 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.007
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.007
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.007
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.11
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.45
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 2.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 2.4
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 30 3.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 3.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 3.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.2
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.6
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 5.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.6
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 7.4
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 7.4
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 7.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 9.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 9.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 9.8
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 9.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 1050 PXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
P G PPP GG PPP PGGF PP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.5 bits (73), Expect = 0.34
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Frame = -2
Query: 1050 PXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXPXGKXXXXFPLXXXXXTXGPXGGFP 871
P GG PP+ G PPP P PP P G P+ P GG P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLP 752
Query: 870 GXTXG---XFXXPRGXPP 826
+ G P G PP
Sbjct: 753 PISGGPPPPPPPPGGCPP 770
Score = 31.9 bits (69), Expect = 1.0
Identities = 25/71 (35%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPX-----PPPXXXGPGXFXGGXGX-----GXXXPTPXXPGXGGF 544
P G P PP G P PPP G GG G P P P GGF
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 543 FXXEKXXPPPP 511
K PPPP
Sbjct: 781 ----KGGPPPP 787
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 1053 PPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
PP GG PP+ G PPP PGG PP P
Sbjct: 743 PPPPPPGGL---PPISGGPPP-PPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPG 556
P G P PP PPP PG F GG P P PG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG------PPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 1050 PXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
P G PPP GG PPP PGGF PP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.5 bits (73), Expect = 0.34
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Frame = -2
Query: 1050 PXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXPXGKXXXXFPLXXXXXTXGPXGGFP 871
P GG PP+ G PPP P PP P G P+ P GG P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLP 752
Query: 870 GXTXG---XFXXPRGXPP 826
+ G P G PP
Sbjct: 753 PISGGPPPPPPPPGGCPP 770
Score = 31.9 bits (69), Expect = 1.0
Identities = 25/71 (35%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPX-----PPPXXXGPGXFXGGXGX-----GXXXPTPXXPGXGGF 544
P G P PP G P PPP G GG G P P P GGF
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 543 FXXEKXXPPPP 511
K PPPP
Sbjct: 781 ----KGGPPPP 787
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 1053 PPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
PP GG PP+ G PPP PGG PP P
Sbjct: 743 PPPPPPGGL---PPISGGPPP-PPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPG 556
P G P PP PPP PG F GG P P PG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG------PPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 1050 PXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
P G PPP GG PPP PGGF PP P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 33.5 bits (73), Expect = 0.34
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Frame = -2
Query: 1050 PXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXPXGKXXXXFPLXXXXXTXGPXGGFP 871
P GG PP+ G PPP P PP P G P+ P GG P
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLP 335
Query: 870 GXTXG---XFXXPRGXPP 826
+ G P G PP
Sbjct: 336 PISGGPPPPPPPPGGCPP 353
Score = 31.9 bits (69), Expect = 1.0
Identities = 25/71 (35%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPX-----PPPXXXGPGXFXGGXGX-----GXXXPTPXXPGXGGF 544
P G P PP G P PPP G GG G P P P GGF
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 543 FXXEKXXPPPP 511
K PPPP
Sbjct: 364 ----KGGPPPP 370
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 1053 PPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
PP GG PP+ G PPP PGG PP P
Sbjct: 326 PPPPPPGGL---PPISGGPPP-PPPPPGGCPPPPPPP 358
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPG 556
P G P PP PPP PG F GG P P PG
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG------PPPPPPPG 374
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 1053 PPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
PP GG PPP+ G PPP G PP P
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 1053 PPXXXXGGFXXPPPL--GGXPPPXXEXXPGGFXKXPP 949
PP GG PPP+ GG PPP GG PP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPP--PPMMGGIPPPPP 109
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 1050 PXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXPXG 937
P GF PPP G PP GG PP G
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.45
Identities = 28/105 (26%), Positives = 28/105 (26%), Gaps = 2/105 (1%)
Frame = +2
Query: 779 GPPPXXXLKKFXXXXXGGKPRGXXKXPXVXPGXPPXGPX-VXXXXXKGKXXXFFPWGXGG 955
G PP GG P P P GP P G GG
Sbjct: 349 GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGG 408
Query: 956 XFXXPPGXXSXXGGGXPPXGG-GXKNPPXXXXGGLXXXXXXXXPP 1087
PPG G PP GG G PP G PP
Sbjct: 409 YGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = -2
Query: 1053 PPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXPXGKXXXXFPLXXXXXTXGPXGGF 874
PP G PPP P PGG+ PP G P GP
Sbjct: 381 PPQSGPPGAFAPPP-SAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPP-- 437
Query: 873 PGXTXGXFXXPRGXPP 826
PG P G PP
Sbjct: 438 PGGPGAYGPPPTGFPP 453
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Frame = +2
Query: 557 PGXXGVGXWXPXPFPPXKXPGPXXXGGGKGXXXPXG--GKXGXPKXXGKXXXKIXXXRAX 730
PG GV P P P PG GGG+G P G G G P G ++
Sbjct: 141 PGPAGVPG-QPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSG 199
Query: 731 XXXXXXXXXXXXXXPXGPP 787
P GPP
Sbjct: 200 QRGRGLPGPSGAPGPQGPP 218
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 680 GNPXSPLXGXXXPXPPPKXXXPGFXXGGXGXGPXXQPPXPXG 555
G P P P PP PG G G GP PP P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG-PPGPAG 192
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 680 GNPXSPLXGXXXPXPPPKXXXPGFXXGGXGXGPXXQPPXPXG 555
G P P P PP PG G G GP PP P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG-PPGPAG 192
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 680 GNPXSPLXGXXXPXPPPKXXXPGFXXGGXGXGPXXQPPXPXG 555
G P P P PP PG G G GP PP P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG-PPGPAG 192
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 680 GNPXSPLXGXXXPXPPPKXXXPGFXXGGXGXGPXXQPPXPXG 555
G P P P PP PG G G GP PP P G
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG-PPGPAG 192
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -2
Query: 1083 GXXXXFXXXRPPXXXXGGFXX-PPPLGGXPPPXXEXXPGGFXKXPPXP 943
G F PP G+ PPP G PPP P GF P P
Sbjct: 697 GVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPP 744
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 666 PPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGG 547
PP G PPP P GG G P PG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 674 PXSPLXGXXXPXPPPKXXXPGFXXGGXGXGPXXQPPXP 561
P P G P PP PG GG G P P P
Sbjct: 780 PMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRP 817
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 666 PPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGG 547
PP G PPP P GG G P PG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 674 PXSPLXGXXXPXPPPKXXXPGFXXGGXGXGPXXQPPXP 561
P P G P PP PG GG G P P P
Sbjct: 780 PMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRP 817
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 687 FXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPPP 511
F G PP G P PPP P G +P P G PPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 687 FXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPPP 511
F G PP G P PPP P G +P P G PPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 687 FXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPPP 511
F G PP G P PPP P G +P P G PPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = +2
Query: 512 GGGGXXFSXXKKPPXPGXXGVGXWXPXPFPPXKXPG---PXXXGGGKGXXXPXGG 667
GGGG PP P G P P + P P GGG G P GG
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/83 (32%), Positives = 28/83 (33%)
Frame = +2
Query: 773 PXGPPPXXXLKKFXXXXXGGKPRGXXKXPXVXPGXPPXGPXVXXXXXKGKXXXFFPWGXG 952
P GPPP GG PRG P G PP + G P G G
Sbjct: 151 PTGPPPLMG--------GGGDPRG----PPGGMGGPPGHGGMGGPPGHGGQGG--PPGHG 196
Query: 953 GXFXXPPGXXSXXGGGXPPXGGG 1021
G PPG G G P GG
Sbjct: 197 GMGGPPPGQGGPGGPGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/83 (32%), Positives = 28/83 (33%)
Frame = +2
Query: 773 PXGPPPXXXLKKFXXXXXGGKPRGXXKXPXVXPGXPPXGPXVXXXXXKGKXXXFFPWGXG 952
P GPPP GG PRG P G PP + G P G G
Sbjct: 431 PTGPPPLMG--------GGGDPRG----PPGGMGGPPGHGGMGGPPGHGGQGG--PPGHG 476
Query: 953 GXFXXPPGXXSXXGGGXPPXGGG 1021
G PPG G G P GG
Sbjct: 477 GMGGPPPGQGGPGGPGGPGGPGG 499
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 1053 PPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXPXG 937
PP PPPL G PPP P G PP P G
Sbjct: 1574 PPPRGGSHCQGPPPLMGGPPPRLGMPPPG----PPPPNG 1608
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +1
Query: 562 GXGGWXXGPXPXPPXKXPGXXXXGGGXGXXXP--XRGEXGXPXKXG 693
G G P P P PG GGG G P G+ G P + G
Sbjct: 137 GPAGAPGAPGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAG 182
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +1
Query: 562 GXGGWXXGPXPXPPXKXPGXXXXGGGXGXXXP--XRGEXGXPXKXG 693
G G P P P PG GGG G P G+ G P + G
Sbjct: 140 GPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAG 185
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPP 514
P P PP P PPP PG G G P P G PPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Query: 513 P 511
P
Sbjct: 339 P 339
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 494 FXFXXXGGGGXXFSXXKKPPXPGXXGVGXWXPXP-FPPXKXPGPXXXGGGKGXXXPXGGK 670
F GGGG + PP P G G P PP P GGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPS---LGGGGGCCPPPAPA 73
Query: 671 XG 676
G
Sbjct: 74 CG 75
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 693 PXFXGXPXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPP 514
P P PP P PPP PG G G P P G PPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Query: 513 P 511
P
Sbjct: 349 P 349
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 557 PGXXGVGXWXPXPFPPXKXPGPXXXGGGKGXXXPXG--GKXGXPKXXG 694
PG G P P P PG GGG+G P G G G P G
Sbjct: 141 PGPAGAPG-QPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAG 187
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 556 PXGXGGWXXGPXPXPPXKXPGXXXXGGGXGXXXPXRGEXGXPXKXG 693
P G GG P P P PG G G P RG G P G
Sbjct: 205 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGP-RGPPGIPGAPG 249
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 556 PXGXGGWXXGPXPXPPXKXPGXXXXGGGXGXXXPXRGEXGXPXKXG 693
P G GG P P P PG G G P RG G P G
Sbjct: 186 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGP-RGPPGIPGAPG 230
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -2
Query: 1116 GXPXXKIFFSGGXXXXFXXXRPPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
G K ++ G PP GGF PPP PPP PP P
Sbjct: 643 GAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPP---PPPPMPGDLSSLLAAAPPPP 697
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -2
Query: 1116 GXPXXKIFFSGGXXXXFXXXRPPXXXXGGFXXPPPLGGXPPPXXEXXPGGFXKXPPXP 943
G K ++ G PP GGF PPP PPP PP P
Sbjct: 643 GAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPP---PPPPMPGDLSSLLAAAPPPP 697
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 675 PXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPPP 511
P PP G P PPP G G G P P G G PPPP
Sbjct: 96 PPPPPKGTGTPPPPPT--GEPQDLSGEGNASRRPPPPPKGTGS-------PPPPP 141
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 675 PXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPPP 511
P PP G P PPP G G G P P G G PPPP
Sbjct: 127 PPPPPKGTGSPPPPPT--GEPQDLSGEGNASRRPPPPPKGTGS-------PPPPP 172
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 675 PXFPPXGXXXPXPPPXXXGPGXFXGGXGXGXXXPTPXXPGXGGFFXXEKXXPPPP 511
P PP G P PPP G G G P P G G PPPP
Sbjct: 220 PPPPPKGTGSPTPPP--TGEPQDLSGEGNASRRPPPPPKGTGS-------PPPPP 265
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 569 GVGXWXPXP-FPPXKXPGPXXXGGGKGXXXPXGG 667
G G + P PP P P GGG G P GG
Sbjct: 52 GGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 569 GVGXWXPXP-FPPXKXPGPXXXGGGKGXXXPXGG 667
G G + P PP P P GGG G P GG
Sbjct: 52 GGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.152 0.519
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,556,003
Number of Sequences: 27780
Number of extensions: 371075
Number of successful extensions: 1466
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3735997402
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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