Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H06
         (1293 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB75E0 Cluster: PREDICTED: hypothetical protein;...    35   4.0  
UniRef50_Q5QVP2 Cluster: Xaa-Pro dipeptidase 2; n=2; Idiomarina|...    35   4.0  
UniRef50_UPI00015B52EC Cluster: PREDICTED: similar to ENSANGP000...    34   9.2  

>UniRef50_UPI0000DB75E0 Cluster: PREDICTED: hypothetical protein; n=1;
            Apis mellifera|Rep: PREDICTED: hypothetical protein -
            Apis mellifera
          Length = 343

 Score = 35.1 bits (77), Expect = 4.0
 Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
 Frame = +3

Query: 1113 GGPXX*XXXXXDXGLGGXPXGXXGXFXFXPXPG-XXXXKGXPPG----GGPPXXXGGXXX 1277
            GGP        D G GG P G  G        G     +G PPG    GGPP   G    
Sbjct: 19   GGPMRGRGGFGDRGRGGPPRGGGGMMRGGRGSGPGGGMRGGPPGMRGRGGPPGRGGRGGG 78

Query: 1278 XXPPG 1292
              PPG
Sbjct: 79   HFPPG 83


>UniRef50_Q5QVP2 Cluster: Xaa-Pro dipeptidase 2; n=2;
           Idiomarina|Rep: Xaa-Pro dipeptidase 2 - Idiomarina
           loihiensis
          Length = 438

 Score = 35.1 bits (77), Expect = 4.0
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 601 VNPIEKCYIPV--SPQAHGFQQMTINNPKHLLYECKKKV*QPLEVPMQKWQPHFSL 440
           VNP+ K ++PV  SP++  F +     P   L++ +     P+ VP ++WQ H  L
Sbjct: 48  VNPLFKYWVPVTESPKSAIFYRKGSQRPTVYLFQARDFWHAPVNVPEEEWQQHVDL 103


>UniRef50_UPI00015B52EC Cluster: PREDICTED: similar to
            ENSANGP00000014755; n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to ENSANGP00000014755 - Nasonia
            vitripennis
          Length = 333

 Score = 33.9 bits (74), Expect = 9.2
 Identities = 18/47 (38%), Positives = 18/47 (38%)
 Frame = +3

Query: 1152 GLGGXPXGXXGXFXFXPXPGXXXXKGXPPGGGPPXXXGGXXXXXPPG 1292
            G GG P G  G F   P  G     G P GGG     GG      PG
Sbjct: 119  GFGGRPGGGGGGFGARPGGGGGGGFGGPGGGGGFGGAGGGGGFGGPG 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,019,131,573
Number of Sequences: 1657284
Number of extensions: 19346330
Number of successful extensions: 40650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39596
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 132414320193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)