Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H06
         (1293 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   2.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   5.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   6.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 673 HFKRFI*IWNGTYQIFPEHNVILRTRFK 756
           H   F+ +  G  Q F   NVIL+TRFK
Sbjct: 176 HMLSFLMVHQGETQ-FVAANVILKTRFK 202


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
            transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 1284 GXXXGXPXXXXGAPPPGGXP 1225
            G   G P    G PP GG P
Sbjct: 55   GLRQGIPPHHYGGPPSGGQP 74


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 389 NIYSDLLVIYIVCKLL 436
           NIY+ +  +Y +CKL+
Sbjct: 20  NIYTSMKPVYAICKLI 35


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 389 NIYSDLLVIYIVCKLL 436
           NIY+ +  +Y +CKL+
Sbjct: 20  NIYTSMKPVYAICKLI 35


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 937  GVSPMYPTWSSIFWHP 890
            G +  YP W    WHP
Sbjct: 1361 GSTTNYPEWQPTEWHP 1376


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 453 GCHFCIGTSKGCYTFFLHSY 512
           G HF   T +GC +FF  +Y
Sbjct: 14  GFHFGAFTCEGCKSFFGRTY 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,015
Number of Sequences: 336
Number of extensions: 5395
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38124331
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)