Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H04
         (1245 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJ48 Cluster: Putative uncharacterized protein; n=1; ...    35   3.8  
UniRef50_A2QCT4 Cluster: Similarities are mainly based on repete...    35   5.0  
UniRef50_Q0UJE1 Cluster: Putative uncharacterized protein; n=1; ...    34   8.8  

>UniRef50_Q8IJ48 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 405

 Score = 35.1 bits (77), Expect = 3.8
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -1

Query: 780 GTPRCLTSKRPSPNEGLG*AN--PPSELNPKADDALWLPKLFPKPVPKDAACEAAPETDG 607
           G    LT   P+ N+G    N  PPSE N    D    P   P  VP+DA   ++P  +G
Sbjct: 159 GFVNLLTPSSPTQNDGSTGRNVPPPSEPNVDTPDPPTAPA--PVKVPEDAKLSSSPRPEG 216

Query: 606 PATPN 592
           P   N
Sbjct: 217 PRANN 221


>UniRef50_A2QCT4 Cluster: Similarities are mainly based on
           repetetive structures; n=3; Aspergillus|Rep:
           Similarities are mainly based on repetetive structures -
           Aspergillus niger
          Length = 929

 Score = 34.7 bits (76), Expect = 5.0
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = -1

Query: 759 SKRPSPNEGLG*ANPPSE---LNPKADDALWLPKLFPKPVPKDAACEAAPETDGPATPN 592
           S RP P+  +    PP +   LN KA      P + PK  P + A  AAP    P  PN
Sbjct: 283 SPRPQPSPQIATGRPPQQPPVLNGKAFPTPTQPTIVPKNAPVNHAPVAAPPAPSPKPPN 341


>UniRef50_Q0UJE1 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 222

 Score = 33.9 bits (74), Expect = 8.8
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 791 RESSGLHGV*RLKDHHRTKGWVERTHQVN*IRRLTTR 681
           R+S  L  V RL   H +KGW+ R H+   ++RL  R
Sbjct: 183 RDSDKLQDVLRLSPKHTSKGWLRRAHESGRVQRLFPR 219


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,636,647
Number of Sequences: 1657284
Number of extensions: 14144175
Number of successful extensions: 35319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35208
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125935332049
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)