Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H04
         (1245 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0207 + 13017538-13017670,13019486-13019658,13020754-130208...    32   0.82 
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993...    29   5.8  
03_05_1100 - 30404224-30405018,30405100-30405435                       29   7.6  

>06_02_0207 +
           13017538-13017670,13019486-13019658,13020754-13020845,
           13022213-13022271,13022659-13022759,13023907-13023988,
           13024092-13024321
          Length = 289

 Score = 32.3 bits (70), Expect = 0.82
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +1

Query: 130 RHRXISSNHEAPVLLSLLGAAFKNRFARALRLRFSGSASRKEIXTSDNTSRLAC 291
           R   ++     P+ L+ L  A  +RF RALRL FS +AS   +  + N   L C
Sbjct: 75  RSAAVAPGRSYPLFLASLPVASSSRFTRALRL-FSANASINYVLIATNCRCLCC 127


>02_01_0015 -
           98311-98412,98635-98707,98830-98921,99139-99230,
           99363-99432,99683-99781,100008-100093,100541-100655,
           100853-100918,101064-101143,101226-101301,101915-102151,
           102559-102590,102993-103047,103384-103498,104497-104579,
           105182-105232,105740-105802,105945-106010,106144-106279,
           106503-106591,106844-106964,107138-107340,107434-107820
          Length = 862

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 205 FARALRLRFSGSASRKEIXTSDNTSRLACFXTLRA 309
           FA A  L FSG   R    T+ N++R  C  T+RA
Sbjct: 243 FADAEALLFSGMLKRTTAATNANSNRSQCIITIRA 277


>03_05_1100 - 30404224-30405018,30405100-30405435
          Length = 376

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 12  PTGXSFISVGFLEGLRRVPXANTSX*PSSAPLQTSSVAKSASXHQLQP*GSC 167
           P    F + GFL G + +        P  +   +SS + S+S HQ QP  +C
Sbjct: 119 PDRWEFANEGFLRGKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQPAAAC 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,244,468
Number of Sequences: 37544
Number of extensions: 433160
Number of successful extensions: 1254
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3841085160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)