Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H04
         (1245 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical pr...    30   3.0  
AC006610-7|AAK85451.1|  392|Caenorhabditis elegans Hypothetical ...    29   6.8  
AF036693-7|AAO61432.1|  343|Caenorhabditis elegans Hypothetical ...    29   9.0  
AF036693-6|AAK29792.1|  428|Caenorhabditis elegans Hypothetical ...    29   9.0  

>U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical
           protein K03C7.1 protein.
          Length = 867

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -1

Query: 756 KRPSPNEGLG*ANPPSELNPKADDALWLPKLFPKPVPKDAACEAAPETDGPATP 595
           K+P   +       P + +PK        K   KP PKDA  +A P  + PA P
Sbjct: 374 KKPDTEDPADPLGGPKKKDPKLAKKAPAKKPTDKPKPKDAPKDAKPTPEEPAKP 427


>AC006610-7|AAK85451.1|  392|Caenorhabditis elegans Hypothetical
           protein C30F12.5 protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 23/71 (32%), Positives = 30/71 (42%)
 Frame = -1

Query: 804 RSSGKGKFGTPRCLTSKRPSPNEGLG*ANPPSELNPKADDALWLPKLFPKPVPKDAACEA 625
           R + K K+   +  T K   P   L    PPS LNP+  DA++       P+P       
Sbjct: 228 RKNKKEKYEVTKPATYKSIEP---LYVITPPSTLNPRHHDAIYSTPYSGSPLP----YPP 280

Query: 624 APETDGPATPN 592
            P T  P TPN
Sbjct: 281 PPGTTVPHTPN 291


>AF036693-7|AAO61432.1|  343|Caenorhabditis elegans Hypothetical
           protein C49A9.9b protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -1

Query: 864 GEIFDFPFXNAAAPIPLXLXRSSGKGKFGTPRCLTSKRPSPNEGLG*ANPPSELNPKADD 685
           G+I  F   + AA  P     +SG+ K G+    T+K+P P  G G ++     +PK + 
Sbjct: 137 GKIVHFEAVDIAAQAPNERFVNSGQ-KVGSGFSTTAKKPEPIVGTGFSSASRTESPKPNS 195

Query: 684 ALWLPKLFPKP-VPK 643
            + + K F +P  PK
Sbjct: 196 TV-VGKGFQRPQTPK 209


>AF036693-6|AAK29792.1|  428|Caenorhabditis elegans Hypothetical
           protein C49A9.9a protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -1

Query: 864 GEIFDFPFXNAAAPIPLXLXRSSGKGKFGTPRCLTSKRPSPNEGLG*ANPPSELNPKADD 685
           G+I  F   + AA  P     +SG+ K G+    T+K+P P  G G ++     +PK + 
Sbjct: 137 GKIVHFEAVDIAAQAPNERFVNSGQ-KVGSGFSTTAKKPEPIVGTGFSSASRTESPKPNS 195

Query: 684 ALWLPKLFPKP-VPK 643
            + + K F +P  PK
Sbjct: 196 TV-VGKGFQRPQTPK 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,519,832
Number of Sequences: 27780
Number of extensions: 321283
Number of successful extensions: 789
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)