Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H03
         (1297 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1058 - 25735902-25736000,25736085-25736152,25736575-257366...    35   0.16 
02_01_0497 + 3607227-3607462,3607600-3607661,3608138-3608286,360...    31   2.0  
01_06_0082 + 26279699-26279996,26280100-26280315,26280438-262808...    30   4.6  

>12_02_1058 -
           25735902-25736000,25736085-25736152,25736575-25736638,
           25736838-25736919,25737503-25737561,25737664-25737723,
           25737884-25738046,25738236-25738360,25738827-25738859,
           25739098-25739160,25739364-25739423,25739972-25740196,
           25740272-25740433
          Length = 420

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +1

Query: 358 AVSXPDEVKXHGHIPNSINIPLGTISTVLGEM-SDKEFNKTYKRPKPNQNTELIFYCMVG 534
           AV  P +    GH+P S  +P   +     ++   +E  K +++   + +  L+  C  G
Sbjct: 321 AVPEPRKGIRSGHVPGSKCVPFPQLLDSSQKLLPPEELRKRFEQEGISLDQPLVSSCGTG 380

Query: 535 RRSAKAQESAINLGFKNTKNYQGSWTEWAS 624
             +         LG  +   Y GSWTEW +
Sbjct: 381 VTACILALGLHRLGKTDVPVYDGSWTEWGA 410


>02_01_0497 +
           3607227-3607462,3607600-3607661,3608138-3608286,
           3608418-3608538,3608638-3608793,3609041-3609086,
           3609414-3609480,3609553-3609629,3610180-3610249,
           3610956-3611014,3611105-3611213,3611552-3611611,
           3611701-3611763,3612007-3612131,3612260-3612422,
           3612506-3612565,3612802-3612860,3613057-3613138,
           3613227-3613290,3613506-3613573,3613648-3613758
          Length = 668

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = +1

Query: 370 PDEVKXHGHIPNSINIP-LGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMVGRRSA 546
           P E    GHIP +  +P L         +   E  K +++   + +  ++  C  G  + 
Sbjct: 569 PREGVRSGHIPGTKCVPFLEMFDDAPMLLPADEIRKKFEQAGISLDRPIVVTCGSGVTAC 628

Query: 547 KAQESAINLGFKNTKNYQGSWTEW 618
                   +G ++   Y GSWTEW
Sbjct: 629 ILALGLYRIGKQDIPVYDGSWTEW 652


>01_06_0082 +
           26279699-26279996,26280100-26280315,26280438-26280863,
           26280966-26281168
          Length = 380

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 421 LGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMVGRRSAKAQESAINLGFK 582
           LG    V+GE+   ++N  +   +P +        ++GR  A  QE  INLG K
Sbjct: 178 LGESLIVMGEIGGNDYNFWFTARQPRETARQYLPDVIGRIGAAVQE-VINLGAK 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,367,344
Number of Sequences: 37544
Number of extensions: 279581
Number of successful extensions: 496
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4038959244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)