Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_H03
         (1297 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3451|AAF56229.2|  148|Drosophila melanogaster CG6000-PA...   116   9e-26
AY070705-1|AAL48176.1|  110|Drosophila melanogaster RH54517p pro...    83   8e-16
AE014297-1577|AAF54857.2|  110|Drosophila melanogaster CG12279-P...    83   8e-16
X07311-1|CAA30276.1|  111|Drosophila melanogaster heat shock pro...    75   2e-13
AE014296-1626|AAF50291.1|  111|Drosophila melanogaster CG4456-PB...    75   2e-13
AE014296-1625|AAN11961.1|  111|Drosophila melanogaster CG4456-PA...    75   2e-13

>AE014297-3451|AAF56229.2|  148|Drosophila melanogaster CG6000-PA,
           isoform A protein.
          Length = 148

 Score =  116 bits (278), Expect = 9e-26
 Identities = 56/109 (51%), Positives = 69/109 (63%)
 Frame = +1

Query: 301 VADYAXVVKAXSNNNXLLIAVSXPDEVKXHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 480
           + DY  V K  S    LLI V  P+E+K  G IP SINIPLG +S  L   S++ F   Y
Sbjct: 36  IVDYDVVKKLPSEPQKLLIDVREPEELKETGQIPASINIPLGVVSQELAA-SEQLFKSKY 94

Query: 481 KRPKPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWTEWASK 627
            R KP   TE+IF+C +G+RS KA E+A  LGFKN KNYQGSW +WA +
Sbjct: 95  GREKPKPETEIIFHCKIGKRSLKAAEAAAALGFKNVKNYQGSWLDWAER 143


>AY070705-1|AAL48176.1|  110|Drosophila melanogaster RH54517p
           protein.
          Length = 110

 Score = 83.0 bits (196), Expect = 8e-16
 Identities = 44/109 (40%), Positives = 59/109 (54%)
 Frame = +1

Query: 301 VADYAXVVKAXSNNNXLLIAVSXPDEVKXHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 480
           +A Y  V    ++    L  V    E+K  G +P SINIPL  +   L  + +++F +TY
Sbjct: 1   MATYEEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPLSELEKALN-LPEEDFAQTY 59

Query: 481 KRPKPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWTEWASK 627
            R KP  +  LIF C  G R+A+A   A  LGF N K Y GSWTEW +K
Sbjct: 60  GRVKPAVDAVLIFSCKAGGRAARAANLASTLGFTNAKAYAGSWTEWQAK 108


>AE014297-1577|AAF54857.2|  110|Drosophila melanogaster CG12279-PA
           protein.
          Length = 110

 Score = 83.0 bits (196), Expect = 8e-16
 Identities = 44/109 (40%), Positives = 59/109 (54%)
 Frame = +1

Query: 301 VADYAXVVKAXSNNNXLLIAVSXPDEVKXHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 480
           +A Y  V    ++    L  V    E+K  G +P SINIPL  +   L  + +++F +TY
Sbjct: 1   MATYEEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPLSELEKALN-LPEEDFAQTY 59

Query: 481 KRPKPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWTEWASK 627
            R KP  +  LIF C  G R+A+A   A  LGF N K Y GSWTEW +K
Sbjct: 60  GRVKPAVDAVLIFSCKAGGRAARAANLASTLGFTNAKAYAGSWTEWQAK 108


>X07311-1|CAA30276.1|  111|Drosophila melanogaster heat shock
           protein protein.
          Length = 111

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 39/109 (35%), Positives = 57/109 (52%)
 Frame = +1

Query: 301 VADYAXVVKAXSNNNXLLIAVSXPDEVKXHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 480
           +A Y  V    ++ +  LI V   +E++  G IP SINIPL  +   L  +    F   Y
Sbjct: 1   MATYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKALN-LDGSAFKNKY 59

Query: 481 KRPKPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWTEWASK 627
            R KP + + +IF C  G R  +A++ A + G+ N   Y+GSW EWA K
Sbjct: 60  GRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGYSNVVIYKGSWNEWAQK 108


>AE014296-1626|AAF50291.1|  111|Drosophila melanogaster CG4456-PB,
           isoform B protein.
          Length = 111

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 39/109 (35%), Positives = 57/109 (52%)
 Frame = +1

Query: 301 VADYAXVVKAXSNNNXLLIAVSXPDEVKXHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 480
           +A Y  V    ++ +  LI V   +E++  G IP SINIPL  +   L  +    F   Y
Sbjct: 1   MATYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKALN-LDGSAFKNKY 59

Query: 481 KRPKPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWTEWASK 627
            R KP + + +IF C  G R  +A++ A + G+ N   Y+GSW EWA K
Sbjct: 60  GRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGYSNVVIYKGSWNEWAQK 108


>AE014296-1625|AAN11961.1|  111|Drosophila melanogaster CG4456-PA,
           isoform A protein.
          Length = 111

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 39/109 (35%), Positives = 57/109 (52%)
 Frame = +1

Query: 301 VADYAXVVKAXSNNNXLLIAVSXPDEVKXHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 480
           +A Y  V    ++ +  LI V   +E++  G IP SINIPL  +   L  +    F   Y
Sbjct: 1   MATYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKALN-LDGSAFKNKY 59

Query: 481 KRPKPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWTEWASK 627
            R KP + + +IF C  G R  +A++ A + G+ N   Y+GSW EWA K
Sbjct: 60  GRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGYSNVVIYKGSWNEWAQK 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,531,740
Number of Sequences: 53049
Number of extensions: 467732
Number of successful extensions: 841
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7008348120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)