Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G23
         (1269 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    32   0.041
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    29   0.29 
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    26   2.7  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    25   3.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   8.2  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   8.2  

>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 31.9 bits (69), Expect = 0.041
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = -3

Query: 562 LYPNWRSANGLWANQRNTLHWYAPGELSKELHNRPSKQSLCHHRPHRQPYCLSCLTKSHR 383
           L P+W  ANGL    R T   Y   EL KE H   +   L   R     + L CLT+   
Sbjct: 225 LLPDWIGANGLRRRGRQTYTRYQTLELEKEFH---TNHYLTRRRRIEMAHAL-CLTERQI 280

Query: 382 KV 377
           K+
Sbjct: 281 KI 282


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 29.1 bits (62), Expect = 0.29
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
 Frame = +1

Query: 328 PDGGTLIEVQKLEWSDGLFDVTWSGSSDNTAACGAGDGTVIVWRV--------GCAAPLR 483
           P    L ++ KL + DG+  ++W  S  +  +C    G+ +            GC     
Sbjct: 624 PHSLLLAKLSKLGFGDGI--ISWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQGCVLSPL 681

Query: 484 VLRAHTSEVCSVDWPRGHLLSASWDTTVKLWDPESETCLS 603
           +     ++VC+V  P GHLL A  D  + L    S  C+S
Sbjct: 682 LFSLFINDVCNVLPPDGHLLYAD-DIKIFLPVSSSSDCMS 720


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 252 RPSPREPDAISMTTRRQKCWHAESIVLLFYIVHPIHSNRIGFLSNSN 112
           +PSPR+  A S  +RR        +V  F    P H+ R+ ++   N
Sbjct: 250 QPSPRQSFANSQGSRRVLKMLVAVVVAFFICWAPFHAQRLVYIYGVN 296


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 594 VSQHVHGSFAAGVHGGVLSPFAGHFRLGLRGRTPQTMGLQ 713
           VSQ+   +F+  V GG+   F   +R+G+ G       +Q
Sbjct: 331 VSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQ 370


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 531 SGPINGTHFTGMRPENSQRSCTTDPPNNHCAITGPTG 421
           SG      ++G++ E  +  C + PPN   AI GP G
Sbjct: 743 SGDKGDKGYSGLKGEPGR--CASIPPNLEEAIRGPQG 777


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -3

Query: 541 ANGLWANQRNTLHWYAPGELSKELHNRPSKQSLCHHRPHRQPYCLSCLTKSHRKV 377
           ANGL    R T   Y   EL KE H   +   L   R     + L CLT+   K+
Sbjct: 215 ANGLRRRGRQTYTRYQTLELEKEFH---TNHYLTRRRRIEMAHAL-CLTERQIKI 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 934,665
Number of Sequences: 2352
Number of extensions: 19800
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 145513932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)