Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G23
         (1269 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   1.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   1.9  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   9.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   9.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   9.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   9.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   9.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   9.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   9.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   9.9  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   9.9  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 409 LSCLTKSHRKVHRSTLISELRSRSRHQEQALRRTRFLR 296
           L  LTK+ R +   +L    R  + H+EQ  R  RFLR
Sbjct: 87  LGLLTKAKRFI--KSLEERERKHAVHKEQLSREQRFLR 122


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 543 ERQLGYNRQTLGPRVRNVSQHVHGSFAAGVHGGVLS 650
           E+    +R +L PRV N S  VH   +A  +    S
Sbjct: 725 EQHFRQHRDSLSPRVENRSAIVHSEASANANSSTSS 760


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 358 SELRSRSRHQEQALRRTR 305
           SE   RSR QE+ LRR R
Sbjct: 23  SETGLRSRTQEERLRRRR 40


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 478 KELHNRPSKQSLCHHRPHRQPYCLSCLTKSHRKV-HRSTLISELRSRSRHQEQALRRTR 305
           + +H RPSK+ +C+    ++ Y      ++H+ + HR    S+   + +  EQ   R R
Sbjct: 23  QNVHTRPSKEPICN--ICKRVYSSLNSLRNHKSIYHRQH--SKNEQQRKEMEQMRERER 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,835
Number of Sequences: 438
Number of extensions: 5088
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43462806
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)