Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G22
         (1195 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   4.4  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   4.4  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    25   5.8  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   5.8  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 459 ISNDLNNIIIMKETKNMVVNGTTGM 533
           +SN   +I +++    MVVNGT G+
Sbjct: 613 VSNGTTSIGLLENNLTMVVNGTLGL 637


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
 Frame = +3

Query: 318 TELSRIF----LKKLI---NCIEPVQEVHDNLYAELCRAMNNSAIED 437
           T L R+F    +KKL    +C EP+ +  D+  A+LCR M+   +E+
Sbjct: 90  TVLRRLFEELNIKKLCYEQDC-EPIWKERDDAVAKLCRTMDVRCVEN 135


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 24.6 bits (51), Expect = 5.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 441 NSLL*HCYSLLDTIQHIDYREPPAQVLYNLLAF 343
           NSL+ HC S + T QH  +  P   V  NL+ F
Sbjct: 21  NSLMYHCRSYISTHQHGFF--PRRSVTTNLVKF 51


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 5.8
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 345 KLINCIEPVQEVHDNLYAELCRAMNNSAIEDYCYRHYVISND 470
           K+ +  E +  V D++YAE C  +  + I  +  R  V+  +
Sbjct: 773 KIQDIKESMNNVEDDVYAEFCARIGVANIRQFEERELVLQQE 814


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,655
Number of Sequences: 2352
Number of extensions: 14475
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 135295257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)