Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G22
         (1195 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical pr...    59   5e-09
CU457741-20|CAO82033.1|  206|Caenorhabditis elegans Hypothetical...    44   2e-04
U23522-2|AAC46818.1|  521|Caenorhabditis elegans Hypothetical pr...    42   9e-04
Z66514-2|CAA91342.1|  229|Caenorhabditis elegans Hypothetical pr...    38   0.011
CU457741-19|CAM36356.1|  167|Caenorhabditis elegans Hypothetical...    32   0.70 
AF106581-6|ABC48242.1|  386|Caenorhabditis elegans Hypothetical ...    31   2.1  
AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical ...    29   6.5  

>Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical
           protein R08D7.4 protein.
          Length = 371

 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
 Frame = +3

Query: 294 VIKKYPISTELSRIFLKKLINCIEPVQEV-HDNLYAELCRAMNNSAIEDYCYRHYVISND 470
           ++  + I  +     LK LI+ ++    V  D+++  L   M     E Y  R Y+    
Sbjct: 87  IVTSHEIRYKFQINVLKNLISELQANNVVVPDSMFDRLGSLMGMKEGE-YVERVYLTDGG 145

Query: 471 LNNIIIMKETKNMVVNGTTGMRTWEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITL 650
              +    E  N +  GTTG+  W+A+  L++        ++   +LELGSG G +GI +
Sbjct: 146 DKVLAKFSEAVNQLSMGTTGLSVWQASCDLANLFRLIPSEYNR--ILELGSGCGVSGIAI 203

Query: 651 AKFCEPKSVTMTDCHEDVLQVLCENVDIN-FPSQCKNRSSDGTTYELDNVSXVDVKMLDW 827
           AK      VT+TD  ++VL +L EN+  N   S  ++ S++     + +++  D    +W
Sbjct: 204 AKM-NDCCVTLTDYDDNVLNLLEENIAKNDLKSDTEDSSANNNQATVRSLNWCDFDFSEW 262

Query: 828 NE 833
            E
Sbjct: 263 KE 264


>CU457741-20|CAO82033.1|  206|Caenorhabditis elegans Hypothetical
           protein C42C1.13b protein.
          Length = 206

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 37/102 (36%), Positives = 51/102 (50%)
 Frame = +3

Query: 432 EDYCYRHYVISNDLNNIIIMKETKNMVVNGTTGMRTWEAALMLSDWILCNKELFSSKDVL 611
           E+Y  R    +ND + +II +ET   V     G   W++ALM   +     + F  K VL
Sbjct: 5   EEYA-RVISFNNDHDELIIYQETVTDV-----GGVIWDSALMTIHYFFKYPKPFEGKKVL 58

Query: 612 ELGSGIGFTGITLAKFCEPKSVTMTDCHEDVLQVLCENVDIN 737
           ELGSG G  GI LA       V +TD  E  L ++ +NV+ N
Sbjct: 59  ELGSGTGVGGIALAAL--GADVIITDLPER-LALIEKNVEAN 97


>U23522-2|AAC46818.1|  521|Caenorhabditis elegans Hypothetical
           protein W06B4.2 protein.
          Length = 521

 Score = 41.9 bits (94), Expect = 9e-04
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +3

Query: 540 WEAALMLSDWILCNKELFSSKDVLELGSG-IGFTGITLAKFCEPKSVTMTDCH---EDVL 707
           W  A + SD++  N+EL   K VLE+G+G  G  G+T AK     +V MTD H   E  L
Sbjct: 13  WPCAQVFSDFLCSNQELIEDKLVLEIGAGATGVCGLTTAKL-GAANVWMTD-HPKLEAAL 70

Query: 708 QVLCENVDIN 737
           + L  N++ N
Sbjct: 71  ETLQRNIEAN 80


>Z66514-2|CAA91342.1|  229|Caenorhabditis elegans Hypothetical
           protein K01A11.2 protein.
          Length = 229

 Score = 38.3 bits (85), Expect = 0.011
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +3

Query: 492 KETKNMVVNGTT------GMRTWEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITLA 653
           KE +NM  +  T      G + WE  + L D+I  N+ LF+ K VLELG G     I  A
Sbjct: 35  KELENMETSDITVHKYEGGFKIWECTVDLCDYIEENQTLFAGKSVLELGCGAALPSILTA 94


>CU457741-19|CAM36356.1|  167|Caenorhabditis elegans Hypothetical
           protein C42C1.13a protein.
          Length = 167

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 22/49 (44%), Positives = 27/49 (55%)
 Frame = +3

Query: 591 FSSKDVLELGSGIGFTGITLAKFCEPKSVTMTDCHEDVLQVLCENVDIN 737
           F  K VLELGSG G  GI LA       V +TD  E  L ++ +NV+ N
Sbjct: 13  FEGKKVLELGSGTGVGGIALAAL--GADVIITDLPER-LALIEKNVEAN 58


>AF106581-6|ABC48242.1|  386|Caenorhabditis elegans Hypothetical
           protein VC5.6 protein.
          Length = 386

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +3

Query: 354 NCIEPVQEVHDNLYAEL---CRAMNNSAIEDYCYR 449
           +CIE  Q +   L+ EL   C+ + +S  EDYC+R
Sbjct: 300 DCIEFCQTIRQELFRELNAVCKQLCSSNSEDYCFR 334


>AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical
           protein C40A11.7 protein.
          Length = 220

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 527 CGTINNHILRFLHNYNIIKIIADNIVPVTIVFYST 423
           C  INN I  +  ++ +++IIA    PV ++ Y T
Sbjct: 98  CEPINNQIRTYRSSHELLQIIASTKKPVVVINYIT 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,639,188
Number of Sequences: 27780
Number of extensions: 328757
Number of successful extensions: 823
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)