Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_G20
(1285 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-co... 33 2.2
BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-... 33 2.2
AB208965-1|BAD92202.1| 705|Homo sapiens Rho-associated, coiled-... 33 2.2
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 31 6.8
BC048959-1|AAH48959.1| 569|Homo sapiens ARID4B protein protein. 31 6.8
BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for IM... 31 6.8
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 31 6.8
AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive dom... 31 6.8
AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive dom... 31 6.8
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 31 6.8
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 31 6.8
AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive dom... 31 6.8
AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive dom... 31 6.8
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 31 6.8
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 31 6.8
AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding ... 31 6.8
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 31 6.8
AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein. 31 6.8
>U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-coil
containing protein kinase p160ROCK protein.
Length = 1354
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/86 (24%), Positives = 38/86 (44%)
Frame = +1
Query: 334 KRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQKAIMEK 513
K+ + +HL + +N LQ+ + + + +KTQ + + +K +EK
Sbjct: 749 KQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKG---LEK 805
Query: 514 NMKNSINNRTIEKKEIGSNKAKPTKQ 591
MK IN K+ + A+ TKQ
Sbjct: 806 QMKQEINTLLEAKRLLEFELAQLTKQ 831
>BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated,
coiled-coil containing protein kinase 1 protein.
Length = 1354
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/86 (24%), Positives = 38/86 (44%)
Frame = +1
Query: 334 KRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQKAIMEK 513
K+ + +HL + +N LQ+ + + + +KTQ + + +K +EK
Sbjct: 749 KQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKG---LEK 805
Query: 514 NMKNSINNRTIEKKEIGSNKAKPTKQ 591
MK IN K+ + A+ TKQ
Sbjct: 806 QMKQEINTLLEAKRLLEFELAQLTKQ 831
>AB208965-1|BAD92202.1| 705|Homo sapiens Rho-associated,
coiled-coil containing protein kinase 1 variant protein.
Length = 705
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/86 (24%), Positives = 38/86 (44%)
Frame = +1
Query: 334 KRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQKAIMEK 513
K+ + +HL + +N LQ+ + + + +KTQ + + +K +EK
Sbjct: 427 KQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKG---LEK 483
Query: 514 NMKNSINNRTIEKKEIGSNKAKPTKQ 591
MK IN K+ + A+ TKQ
Sbjct: 484 QMKQEINTLLEAKRLLEFELAQLTKQ 509
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>BC048959-1|AAH48959.1| 569|Homo sapiens ARID4B protein protein.
Length = 569
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for
IMAGE:4663973) protein.
Length = 397
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 151 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 210
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 211 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 245
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 407 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 466
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 467 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 501
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 214 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 273
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 274 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 308
>AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 407 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 466
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 467 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 501
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 214 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 273
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 274 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 308
>AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding
protein 1-like 1 protein.
Length = 1226
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 409 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 468
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 469 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 503
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 422 PEKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPS 481
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 482 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 516
>AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein.
Length = 803
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/95 (18%), Positives = 43/95 (45%)
Frame = +1
Query: 319 PIKLSKRQXXRSKHLXXXXXXXXXQAQNSLLQMNEMEKXCMFCKKSVKTQILKPERIKQK 498
P K+ +Q +++ + + ++M E +K ++ +I + E IK
Sbjct: 90 PEKVVNKQCKECENVKEIKVKEENETEIQEIKMEEERNIIPREEKPIEDEIERKENIKPS 149
Query: 499 AIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDR 603
+KN+ SI + ++KE+ K + + ++D+
Sbjct: 150 LGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,300,814
Number of Sequences: 237096
Number of extensions: 1312536
Number of successful extensions: 2440
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2437
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18440487050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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