Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G20
         (1285 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70205-1|CAA94117.2|  460|Caenorhabditis elegans Hypothetical pr...    33   0.33 
AF000197-3|AAB52898.2|  109|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z92797-1|CAB07234.1|  552|Caenorhabditis elegans Hypothetical pr...    29   9.4  
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p...    29   9.4  
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr...    29   9.4  
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr...    29   9.4  
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    29   9.4  
AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical ...    29   9.4  

>Z70205-1|CAA94117.2|  460|Caenorhabditis elegans Hypothetical
           protein C11H1.2 protein.
          Length = 460

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 18/78 (23%), Positives = 39/78 (50%)
 Frame = +1

Query: 454 SVKTQILKPERIKQKAIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDRISQNINIYSN 633
           S  T  ++P    Q   +EK +K++++    +K+++  N+ +  +   +++SQ  +  S 
Sbjct: 173 SYMTIFMRPVEEIQAQQLEKRLKHAMDMIVSKKQKMARNQLELKRLTAEKVSQEPSFLSK 232

Query: 634 TIEVFKLNNKNNTLASQV 687
               F  N+  N L SQ+
Sbjct: 233 LWSNFSENSNENNLQSQI 250


>AF000197-3|AAB52898.2|  109|Caenorhabditis elegans Hypothetical
           protein T21G5.2 protein.
          Length = 109

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 558 FFFLYSTIVDTIFHVFLHDSLLFNSLRFKDLCFNTFLAKHAXLFHF 421
           F FL   ++ T  H+F +  +LFN   F DL  +T +   +    F
Sbjct: 30  FIFLIQFVIFTYIHIFSYLCVLFNYFLFIDLSISTVIVSFSRFIKF 75


>Z92797-1|CAB07234.1|  552|Caenorhabditis elegans Hypothetical
           protein H25P06.1 protein.
          Length = 552

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 11/50 (22%), Positives = 27/50 (54%)
 Frame = +1

Query: 496 KAIMEKNMKNSINNRTIEKKEIGSNKAKPTKQVNDRISQNINIYSNTIEV 645
           + ++E+  +N +    I  K + +    PTK +++ +  +  +YSNT ++
Sbjct: 336 RLVLERLCENKVLFNGIGSKMLRTRNTFPTKYISEILHDDCGVYSNTRQI 385


>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
           protein C53B4.4e protein.
          Length = 1544

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 510 LHDSLLFNSLRFKDLCFNTFLAKHAXLFHF 421
           L +S +F    F D+CF T L K    FHF
Sbjct: 602 LLNSRIFFFRNFDDVCFQTILTKPLTTFHF 631


>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical
           protein C53B4.4b protein.
          Length = 1586

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 510 LHDSLLFNSLRFKDLCFNTFLAKHAXLFHF 421
           L +S +F    F D+CF T L K    FHF
Sbjct: 602 LLNSRIFFFRNFDDVCFQTILTKPLTTFHF 631


>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical
           protein C53B4.4a protein.
          Length = 1584

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 510 LHDSLLFNSLRFKDLCFNTFLAKHAXLFHF 421
           L +S +F    F D+CF T L K    FHF
Sbjct: 602 LLNSRIFFFRNFDDVCFQTILTKPLTTFHF 631


>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
           protein ZC132.5 protein.
          Length = 1277

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +1

Query: 487 IKQKAIMEKNMKNSINNRTIEKKEIGSNKAKPTK-QVNDRISQNINIYSNTIEV-FKLNN 660
           + +K  MEK      NN TIEK+E G +   P K +V D++  N  I    ++   K N 
Sbjct: 114 VDEKLEMEKKTTQFFNN-TIEKRENGYHVRLPFKEEVIDKLPSNFAIAKKRLQSGLKANP 172

Query: 661 KNNTLASQV 687
           +   L + V
Sbjct: 173 QVKKLVNDV 181


>AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical
           protein Y50D4B.6 protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 741 CILVLPLFIIVYYFWWFFHL 682
           CI+V+ L ++ YY W F++L
Sbjct: 12  CIVVIALSVLFYYVWKFYYL 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,173,472
Number of Sequences: 27780
Number of extensions: 224380
Number of successful extensions: 757
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)