Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_G19
(1280 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0483 - 8804021-8804485 50 3e-06
03_02_0484 + 8805053-8805538 50 4e-06
03_02_0485 - 8808139-8808618 49 7e-06
03_02_0478 + 8775892-8776377 48 1e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 46 8e-05
01_01_0229 - 1943473-1943922 45 1e-04
01_01_0231 + 1951047-1951499 45 1e-04
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 42 0.001
01_01_0227 + 1933247-1933699 40 0.003
02_02_0586 - 11861509-11861637,11863651-11863815,11864738-118648... 33 0.48
05_04_0052 - 17515344-17517353 33 0.64
06_01_1017 - 7951985-7952425 32 1.1
10_08_0303 - 16638379-16640199 31 1.5
12_01_0862 + 8161117-8163913,8164000-8164019 30 4.5
08_02_1473 - 27358162-27358275,27358968-27359024,27359102-273592... 29 7.9
02_02_0489 + 10869482-10871218 29 7.9
>03_02_0483 - 8804021-8804485
Length = 154
Score = 50.4 bits (115), Expect = 3e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +1
Query: 346 DVQHFTPEEISVKTADGYIV-IEGQH----EEKQDEHGYVTRH---FKRRYALPEGCKPE 501
DV EE+ V+ DG ++ I G+ EEK D+ V R F RR+ LPE KPE
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 502 TVESRLSSDGVLTVIAPKSSQSK-DERAVPIT 594
+++ + +GVLTV PK K D +++ IT
Sbjct: 123 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIT 153
>03_02_0484 + 8805053-8805538
Length = 161
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +1
Query: 346 DVQHFTPEEISVKTADGYIV-IEGQH----EEKQDEHGYVTRH---FKRRYALPEGCKPE 501
DV EE+ V+ DG ++ I G+ EEK D+ V R F RR+ LPE KPE
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 502 TVESRLSSDGVLTVIAPKSSQSK-DERAVPIT 594
+++ + +GVLTV PK K D +++ +T
Sbjct: 130 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQVT 160
>03_02_0485 - 8808139-8808618
Length = 159
Score = 49.2 bits (112), Expect = 7e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +1
Query: 346 DVQHFTPEEISVKTADGYIV-IEGQH----EEKQDEHGYVTRH---FKRRYALPEGCKPE 501
DV EE+ V+ DG I+ I G+ EEK D+ V R F RR+ LPE KPE
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 502 TVESRLSSDGVLTVIAPKSSQSK-DERAVPIT 594
+++ + +GVLTV PK K D +++ I+
Sbjct: 128 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIS 158
>03_02_0478 + 8775892-8776377
Length = 161
Score = 48.4 bits (110), Expect = 1e-05
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +1
Query: 346 DVQHFTPEEISVKTADGYIV-IEGQH----EEKQDEHGYVTRH---FKRRYALPEGCKPE 501
DV EE+ V+ DG I+ I G+ EEK D+ V R F RR+ LP+ KPE
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 502 TVESRLSSDGVLTVIAPKSSQSK-DERAVPIT 594
+++ + +GVLTV PK K D +++ I+
Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSIQIS 160
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 45.6 bits (103), Expect = 8e-05
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +1
Query: 346 DVQHFTPEEISVKTADGYI-VIEGQH----EEKQDEHGYVTR---HFKRRYALPEGCKPE 501
D+ EE+ V+ +G + VI GQ E+K D+ V R F RR+ LPE K +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 502 TVESRLSSDGVLTVIAPKSSQSKDE-RAVPIT 594
V++ L +GVLTV PK+ K E +A+ I+
Sbjct: 119 QVKAGL-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 45.2 bits (102), Expect = 1e-04
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +1
Query: 346 DVQHFTPEEISVKTADGYI-VIEGQH----EEKQDEHGYVTR---HFKRRYALPEGCKPE 501
D+ EE+ V+ +G + VI GQ E+K D+ V R F RR+ LPE K +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 502 TVESRLSSDGVLTVIAPKSSQSKDE-RAVPIT 594
V++ + +GVLTV PK+ K E +A+ I+
Sbjct: 118 QVKASM-ENGVLTVTVPKAEVKKPEVKAIEIS 148
>01_01_0231 + 1951047-1951499
Length = 150
Score = 44.8 bits (101), Expect = 1e-04
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +1
Query: 346 DVQHFTPEEISVKTADGYI-VIEGQH----EEKQDEHGYVTR---HFKRRYALPEGCKPE 501
D+ EE+ V+ +G + VI GQ E+K D+ V R F RR+ LPE K +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 502 TVESRLSSDGVLTVIAPKSSQSKDE-RAVPIT 594
V++ + +GVLTV PK+ K E +A+ I+
Sbjct: 119 QVKAGM-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 41.9 bits (94), Expect = 0.001
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Frame = +1
Query: 265 PWRNLAAAARDVGSTIKTDRDKLQINLDVQHFTPEEISVKTADGYIVIEGQHEEKQDE-- 438
P R+LA + + D ++++ D+ + EE+ V D +VI G+H++++ E
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 439 ----HGY----VTRHFKRRYALPEGCKPETVESRLSSDGVLTVIAPKSSQSKDERAVPIT 594
G+ + R ALP+ C V + L +GVL V PK+ + V I
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPKTEVERKVIDVQIK 240
Query: 595 HTGPVRRKQHDDDQINGN 648
+ + + D+ GN
Sbjct: 241 YLKKLVMENCSDECTVGN 258
>01_01_0227 + 1933247-1933699
Length = 150
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 406 IEGQHEEKQDEHGYVTRHFKRRYALPEGCKPETVESRLSSDGVLTVIAPKSSQSKDE-RA 582
++G+++E+ + F+RR+ LP G + + V + + +GVLTV PK K + +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 583 VPIT 594
+PI+
Sbjct: 146 IPIS 149
>02_02_0586 -
11861509-11861637,11863651-11863815,11864738-11864846,
11864971-11865065,11865169-11865702,11866299-11866499,
11867826-11868090,11868111-11868736
Length = 707
Score = 33.1 bits (72), Expect = 0.48
Identities = 25/107 (23%), Positives = 46/107 (42%)
Frame = +1
Query: 319 DRDKLQINLDVQHFTPEEISVKTADGYIVIEGQHEEKQDEHGYVTRHFKRRYALPEGCKP 498
+ D++ + D + E S K D E QH++K E + + + E K
Sbjct: 562 EEDEVAASHDGRKPKLRERSHKRRDNKPKAEEQHKDK--EQNLNSSPSNKEEKIMEDTKK 619
Query: 499 ETVESRLSSDGVLTVIAPKSSQSKDERAVPITHTGPVRRKQHDDDQI 639
+S+ SDG + + PK S + ++ VP T+T H + ++
Sbjct: 620 SAQDSKRFSDGQVQEVFPKGSPAPQDQQVPRTNTYSPDNDHHKNHKV 666
>05_04_0052 - 17515344-17517353
Length = 669
Score = 32.7 bits (71), Expect = 0.64
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 481 PEGCKPETVESRLSSDGVLTVIAPKSSQSKDERAVPITHTGPVRRKQHDD-DQINGNAEE 657
P G V + +DG+L+V A + + ER IT +G R+ ++ D++ G AEE
Sbjct: 505 PRGAPQIEVAFEVDADGILSVSAADRATGRSER---ITISGDDRKTSREEIDRMLGEAEE 561
Query: 658 ETKSPQKKRKR 690
++ R+R
Sbjct: 562 FADEDRRHRER 572
>06_01_1017 - 7951985-7952425
Length = 146
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 373 ISVKTADGYIVIEGQHEEKQDEHGYVTRH----FKRRYALPEGCKPETVESRLSSDGVLT 540
++V+ A + E + E ++D +V F R ALP + E + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 541 VIAPKSSQSKDERAVPI 591
V+ PK R PI
Sbjct: 124 VVVPKEPAPARPRTRPI 140
>10_08_0303 - 16638379-16640199
Length = 606
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 292 ERQLPSFATDVHISCAQLADQ*CPLENRPETNP-YRRAG 179
E P FA DV C +LAD C LE E P Y RAG
Sbjct: 486 EASAPGFAGDV--MCDELADDLCELEEEVEDAPRYERAG 522
>12_01_0862 + 8161117-8163913,8164000-8164019
Length = 938
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 259 VRPWRNLAAAARDVGSTIKTDRD-KLQINLDVQHFTPEEISVKTADGYIVIEGQHEEK 429
V P R +AA ++V + ++ R+ KLQ N+D+ + I + + G+ + H +K
Sbjct: 116 VMPLRRIAAELKEVQNRLQNIRNLKLQYNIDLSEESASSIRYEDSKGHTLHHIMHNKK 173
>08_02_1473 -
27358162-27358275,27358968-27359024,27359102-27359245,
27359770-27359934,27360020-27360208,27360301-27360535,
27360826-27360932,27361020-27361103,27361185-27361695,
27361793-27361854,27363373-27363456
Length = 583
Score = 29.1 bits (62), Expect = 7.9
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 2/143 (1%)
Frame = +1
Query: 208 DDFLADIIDRPIVRMKYVRPWRNLAAAARDVGSTIKTDRDKLQINLDVQHFTPEEISVKT 387
DD +A + + + R R + A D S + D V+ P V T
Sbjct: 235 DDEIARAVSMSLETAEQERVLRQVGAHVSD-HSDLSDKEDIEGATGTVERQVPTSGKVGT 293
Query: 388 ADGYIVIEGQHEEKQDEHGYVTRHFKRRYALPEGCKPETVESRLSSDGVLTVIAPKSSQS 567
+D + E ++ +EH +V +H +R +P G E+ E+ ++ + + P + ++
Sbjct: 294 SDQLVDEENFQDDDVEEHSFVRQHSRR---VPSG-NDESTEALERANSHPSSLLPHNIEN 349
Query: 568 KDE--RAVPITHTGPVRRKQHDD 630
+ P G + ++HD+
Sbjct: 350 NQQFNGVFPSEVWGGISSEEHDE 372
>02_02_0489 + 10869482-10871218
Length = 578
Score = 29.1 bits (62), Expect = 7.9
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 259 VRPWRNLAAAARDVGSTIKTDRDKL---QINLDVQHFTPEEISVKTADGYIVIEGQ-HEE 426
V P AA D G+ + + + K +++ D P+E + T +G I+ G+ H+E
Sbjct: 428 VMPKEATTTAASDDGTLVGSKKGKADNGKLDGDTHSVMPKEATAGTQNGGILTGGENHKE 487
Query: 427 KQDEHGYVTRHFKRRYA 477
K D+ V +R YA
Sbjct: 488 KVDKDANVP-SIRREYA 503
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,807,299
Number of Sequences: 37544
Number of extensions: 389452
Number of successful extensions: 1263
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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