Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_G16
(1398 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.031
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.031
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.031
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.29
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.66
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 6.2
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 27 8.2
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.031
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -1
Query: 1080 PXXPXXXPQXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXXXXPX 901
P P P P PP P P PPP P P PP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 900 XTPP 889
P
Sbjct: 1743 VPNP 1746
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = -1
Query: 1032 PPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXXXXPXXTPPXPXPPXXPPXI 856
PP P PPPP P P P P PP P P P +
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVP-----PPPSAPPMPAGPPSAPPPPLPASSAPSV 1743
Score = 26.6 bits (56), Expect = 8.2
Identities = 18/66 (27%), Positives = 18/66 (27%), Gaps = 1/66 (1%)
Frame = -3
Query: 1114 PPXPXXXXXXXPXXXXXXXXXXPXXPXPPXXXXPXXPXXXXPXP-XPPXXXPPXXPXXXX 938
P P P P P PP P P P P PP PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPPPLPASSA 1740
Query: 937 XPPPXP 920
P P
Sbjct: 1741 PSVPNP 1746
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.031
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = -1
Query: 1083 PPXXPXXXPQXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXXXXP 904
PP P PP P PP P P PPL
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL--GNASR 411
Query: 903 XXTPPXPXPPXXPP 862
TPP P PP PP
Sbjct: 412 TSTPPVPTPPSLPP 425
Score = 30.7 bits (66), Expect = 0.50
Identities = 19/73 (26%), Positives = 19/73 (26%)
Frame = -1
Query: 1080 PXXPXXXPQXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXXXXPX 901
P P P PP P P P P PP P P P
Sbjct: 418 PTPPSLPPSAPPSL---PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 900 XTPPXPXPPXXPP 862
PP P P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/79 (24%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = -1
Query: 1083 PPXXPXXXP---QXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXX 913
PP P P + PP P P P P PP+
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 912 XXPXXTPPXPXPPXXPPXI 856
P PP PP PP +
Sbjct: 422 SLPPSAPP-SLPPSAPPSL 439
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/66 (25%), Positives = 17/66 (25%)
Frame = -1
Query: 1059 PQXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXXXXPXXTPPXPX 880
P PP P P P P P P PP P P P
Sbjct: 388 PPAPPPAI--PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA 445
Query: 879 PPXXPP 862
P PP
Sbjct: 446 APPLPP 451
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.031
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 1015 PXXPXXXXPXPXP-PXXXPPXXPXXXXXPPPXPXXXXXXXHPXXPXSXPXPPP 860
P P P P P P PP P PPP P P P P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP---PPPPP 783
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = -3
Query: 991 PXPXPPXXXPPXXPXXXXXPPPXPXXXXXXXHPXXP---XSXPXPPP 860
P P P P P PPP P P P + P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -1
Query: 981 PPPPXXPXPXXXXXXXPPLXPXXXXPXXTPPXPXPPXXPPXI 856
P P P P PP P PP P PP PP +
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP--PPAV 785
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -1
Query: 1083 PPXXPXXXPQXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXP 955
P P P P PP P P PPPP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -3
Query: 1039 PXP-PXXXXPXXPXXXXPXPXPPXXXPPXXPXXXXXPPPXP 920
P P P P P P P PP PP PPP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPP---PPGVAGAGPPPPPPP 781
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.29
Identities = 35/166 (21%), Positives = 38/166 (22%)
Frame = -2
Query: 1154 PXPXXXXPXXXXXPXXPSXXXXXXPPXXPXXXXXXPPXXXPPPXXXXXXXXXXXXXXXPP 975
P P P P P P PP P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 974 XXXXPXXPXXPXXXPPXPHXXXXXXXPXPXPXXPXXPPXSXXXXXXXXLPXPXXXXHXHX 795
P P PP P P P P PP S +P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS----TAPPVPTPSAGLPPVP 1230
Query: 794 XPXLXXXPTXKPXXXPPNXXTXPXXPXPXXPXXTSXPPXTXXSPPS 657
P P P P+ T P P P + P T S S
Sbjct: 1231 VPTAKAPPVPAPSSEAPSVST-PRSSVP-SPHSNASPSPTSSSMAS 1274
Score = 29.9 bits (64), Expect = 0.88
Identities = 22/90 (24%), Positives = 23/90 (25%), Gaps = 1/90 (1%)
Frame = -3
Query: 1126 PXXXPPXPXXXXXXXPXXXXXXXXXXPXXPXPPXXXXPXXPXXXXPX-PXPPXXXPPXXP 950
P PP P P P P P P P P P P PP P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGI--PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 949 XXXXXPPPXPXXXXXXXHPXXPXSXPXPPP 860
P P P + P P P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 4.7
Identities = 19/80 (23%), Positives = 20/80 (25%), Gaps = 4/80 (5%)
Frame = -1
Query: 1083 PPXXPXXXPQXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXXXXP 904
P P P P P P PP P P P P
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIP 1046
Query: 903 XXTPPXP----XPPXXPPXI 856
TPP P P PP +
Sbjct: 1047 TSTPPVPKSSSGAPSAPPPV 1066
Score = 27.5 bits (58), Expect = 4.7
Identities = 30/158 (18%), Positives = 33/158 (20%)
Frame = -2
Query: 1154 PXPXXXXPXXXXXPXXPSXXXXXXPPXXPXXXXXXPPXXXPPPXXXXXXXXXXXXXXXPP 975
P P P P P P P P P PP
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 974 XXXXPXXPXXPXXXPPXPHXXXXXXXPXPXPXXPXXPPXSXXXXXXXXLPXPXXXXHXHX 795
P P P P P PP +P P
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV-P 1143
Query: 794 XPXLXXXPTXKPXXXPPNXXTXPXXPXPXXPXXTSXPP 681
P + P P PP P P P +S P
Sbjct: 1144 KPSVAAPPVPAPSGAPP--VPKPSVAAPPVPAPSSGIP 1179
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/72 (22%), Positives = 17/72 (23%)
Frame = -1
Query: 1071 PXXXPQXPPXXXXPPXXXXPXXPXXXXXXXPPPPXXPXPXXXXXXXPPLXPXXXXPXXTP 892
P P P P PPP P P P P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 891 PXPXPPXXPPXI 856
P P P P +
Sbjct: 1093 PVPKPSVAAPPV 1104
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.66
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Frame = -2
Query: 764 KPXXXPPNXXTXPXXPXPXXPXXTSXPPXT-----XXSPPSXHTTXXXLHTPFPXXTXPP 600
+P PP+ + P P P +S PP SPPS + + P P PP
Sbjct: 146 RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAV-PPMPPKVPPP 204
Query: 599 P 597
P
Sbjct: 205 P 205
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = -3
Query: 1048 PXXPXPPXXXXPXXPXXXXPXPXPPXXXPPXXPXXXXXPPPXPXXXXXXXHPXXPXSXPX 869
P P P P P P P P P P PP P P P P
Sbjct: 128 PAPPTPQSELRP--PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 868 PPP 860
P
Sbjct: 186 SAP 188
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/61 (24%), Positives = 15/61 (24%)
Frame = -3
Query: 1048 PXXPXPPXXXXPXXPXXXXPXPXPPXXXPPXXPXXXXXPPPXPXXXXXXXHPXXPXSXPX 869
P PP P P P PP P PP P P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 868 P 866
P
Sbjct: 205 P 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 933 PPLXPXXXXPXXTPPXPXPPXXPP 862
P P P PP P PP PP
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPP 248
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = -2
Query: 695 TSXPPXTXXSPPSXHTTXXXLHTPFPXXTXPPPTXXXXSPXYHXXSXXTNPPXY 534
T+ PP T ++T P PPPT P Y S PP Y
Sbjct: 77 TAPPPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFP-PPAY 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,701,967
Number of Sequences: 5004
Number of extensions: 19494
Number of successful extensions: 177
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 774999420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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