Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G16
         (1398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   1.7  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   3.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   6.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 17/75 (22%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
 Frame = -2

Query: 980 PPXXXXPXXPXXPXXX-PPXPHXXXXXXXPXPXPXXPXXPPXSXXXXXXXXLPXPXXXXH 804
           PP    P     P    PP P          P P  P  PP +         P P     
Sbjct: 194 PPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQG 253

Query: 803 XHXXPXLXXXPTXKP 759
               P +   P  +P
Sbjct: 254 MQRPPMMGQPPPIRP 268


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 3.0
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +2

Query: 866 GXWGGXGXGGVXXGXXXXGXRGGXXXXXWXGXGXXGGGG 982
           G +GG   G    G    G RGG         G  GGGG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGG 93



 Score = 25.0 bits (52), Expect = 5.2
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = +3

Query: 864 GGXGXXXGXXGXXXXXXXMGXGGGXXXXXGXXGGXXXGGXGXG 992
           GG G      G        G GGG     G  G    GG G G
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGG 97


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 6.9
 Identities = 17/64 (26%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
 Frame = -3

Query: 1048 PXXPXPPXXXXPXXPXXXXPXPXPPXXXPPXXPXXXXXPPPXPXXXXXXXHP-XXPXSXP 872
            P  P PP    P  P    P   P    PP  P         P       +P   P   P
Sbjct: 583  PAPPPPPPMGPPPSPLAGGPLGGPAGSRPP-LPNLLGFGGAAPPVTILVPYPIIIPLPLP 641

Query: 871  XPPP 860
             P P
Sbjct: 642  IPVP 645


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,513
Number of Sequences: 2352
Number of extensions: 5744
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 161745210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)