Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_G10
(1333 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 55 1e-07
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 42 0.001
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 38 0.012
U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 36 0.049
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 35 0.15
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 33 0.34
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 33 0.34
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 33 0.34
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 33 0.34
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 33 0.60
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 31 1.4
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 31 2.4
AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical ... 31 2.4
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 29 5.6
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 29 5.6
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 29 5.6
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z29094-8|CAA82337.1| 254|Caenorhabditis elegans Hypothetical pr... 29 9.8
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 29 9.8
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 55.2 bits (127), Expect = 1e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 417 MCXRCGTQLCGRTRNKHALNHFNTPHSDCHGLAANSTTWEIYCYNCNNEVTASTAKKLHE 596
MC CG LCGR + HAL+HF H + + ++E+YCY+C++EV+ L+
Sbjct: 64 MCLTCGRILCGRNDSGHALHHF---EETSHPVVIDCISFELYCYSCDDEVSLDFEPSLYG 120
Query: 597 CIEYLKKQF 623
++ LK F
Sbjct: 121 VLKSLKLLF 129
Score = 35.9 bits (79), Expect = 0.064
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 681 DFSIIETISKDPLSKGKDKAMVNLGRVRGLXNLGNTCFFNSVMQCL 818
D ++ T S S G + R RG+ N+GNTCF N+V+Q L
Sbjct: 351 DVTLSSTNSTSSGSGGATSSSEIAYRPRGMRNVGNTCFMNAVLQAL 396
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQCLVQTPYLLKVLQR 854
GL N+GNTCF ++ +QCL QTP L +V +
Sbjct: 25 GLFNMGNTCFMSATLQCLFQTPGLAEVFTK 54
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical protein
F41H10.6c protein.
Length = 957
Score = 38.3 bits (85), Expect = 0.012
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 411 LWMCXRCGTQLCGRTRNKHALNHFNTPHSDCHGLAANSTTWEIYCYNCNNEV 566
+W C C CGR N+HA+ H S H +A + ++CY C++ V
Sbjct: 886 VWTCLTCYKYNCGRFVNEHAMMHH---LSSSHPMALSMADLSVWCYPCDSYV 934
>U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical protein
F41H10.6b protein.
Length = 955
Score = 38.3 bits (85), Expect = 0.012
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 411 LWMCXRCGTQLCGRTRNKHALNHFNTPHSDCHGLAANSTTWEIYCYNCNNEV 566
+W C C CGR N+HA+ H S H +A + ++CY C++ V
Sbjct: 884 VWTCLTCYKYNCGRFVNEHAMMHH---LSSSHPMALSMADLSVWCYPCDSYV 932
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 36.3 bits (80), Expect = 0.049
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 714 PLSKGKDKAMVNLGRVRGLXNLGNTCFFNSVMQCLV 821
P + ++K V GL N+GNTCF N+V+Q LV
Sbjct: 407 PYEEDREKVCVVEQGYTGLRNIGNTCFMNAVLQMLV 442
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 34.7 bits (76), Expect = 0.15
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQCLVQTPYL 836
GL NLGNTCF S QCL P L
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPL 299
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQCLVQTPYLL 839
GL NLGNTC+FNS +Q L + L+
Sbjct: 103 GLANLGNTCYFNSCVQMLKEVNELV 127
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQCLVQTPYLL 839
GL NLGNTC+FNS +Q L + L+
Sbjct: 103 GLANLGNTCYFNSCVQMLKEVNELV 127
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQCLVQTPYLL 839
GL NLGNTC+FNS +Q L + L+
Sbjct: 103 GLANLGNTCYFNSCVQMLKEVNELV 127
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 762 RGLXNLGNTCFFNSVMQCLVQTPYLL 839
R L N GN+C+FNS MQ L P L+
Sbjct: 282 RRLYNTGNSCYFNSTMQALSSCPSLV 307
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 32.7 bits (71), Expect = 0.60
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 378 VLDPDFEEDLSL-------WMCXRCGTQLCGRTRNKHALNHFNTPHSDCHGLAANSTTWE 536
VLD DFE+ S+ + C CG GR N HA H +D H + N T +
Sbjct: 146 VLDFDFEKQCSVSLSHQNVYACMVCGKYFQGRGTNTHAYTH--ALETD-HHVFLNLQTLK 202
Query: 537 IYCYNCNNEV 566
YC N EV
Sbjct: 203 FYCLPDNYEV 212
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQCL-VQTPYLLKVL 848
GL N GNTC+ NSV+Q L P+ KVL
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKVL 56
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 744 VNLGRVRGLXNLGNTCFFNSVMQCL 818
VN R L N GN+CF NS MQ L
Sbjct: 139 VNSSVTRKLVNTGNSCFLNSTMQAL 163
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 411 LWMCXRCGTQLCGRTRNKHALNHFN-TPHS 497
LW+C CG CGR +HA H+ T H+
Sbjct: 319 LWICLICGNIGCGRYAEQHAQRHWELTSHT 348
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 759 VRGLXNLGNTCFFNSVMQCLVQTP 830
V GL N GNTC+ N+++Q L P
Sbjct: 44 VPGLANQGNTCYMNALLQGLASCP 67
>AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical
protein F43C11.8 protein.
Length = 338
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = +3
Query: 492 HSDCHGLAANSTTWE-IYCYNCNNEVTASTAKKLHECIEYLKKQFLASSTVKSLPPIELP 668
H+ CHG A I C C ST K L + L+ A + + PI+ P
Sbjct: 44 HTICHGCAEKLLQNSMILCPFCREATNVSTVKDLQKNFALLQAVEHAKTRTEEKDPIDSP 103
Query: 669 --FETKDFSIIETISKDPLSKGKDKAM 743
+ ++ E + +P DK M
Sbjct: 104 PKCASHQYNFAEFVCIEPTCSSSDKLM 130
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQ----CLVQTPYLLKVL 848
G N GNTC+ N+V+Q C T YL++++
Sbjct: 183 GYLNFGNTCYMNAVLQLLGHCSPFTQYLIELI 214
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 705 SKDPLSKGKDKAMVNLGRVRGLXNLGNTCFFNSVMQCL 818
S+ PL D + L R L N GN+C++NS MQ +
Sbjct: 196 SESPLLSS-DVFLRKLHENRQLVNTGNSCYYNSTMQAV 232
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 765 GLXNLGNTCFFNSVMQCLV 821
GL N G++C+ NSV+Q LV
Sbjct: 320 GLVNTGSSCYMNSVLQALV 338
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 705 SKDPLSKGKDKAMVNLGRVRGLXNLGNTCFFNSVMQCL 818
S+ PL D + L R L N GN+C++NS MQ +
Sbjct: 196 SESPLLSS-DVFLRKLHENRQLVNTGNSCYYNSTMQAV 232
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 627 ASSTVKSLPPIELPFETKDFSIIETISKDPLSKGKDKAMVNLGRVRGLXNLGNTCFFNSV 806
A+ +V S P +P S ++ + + D+ N R GL N TC+ NS+
Sbjct: 46 AAPSVDSSPGRSVPLAIASSSSPANVANNQYAIPVDE---NGHRYVGLVNQAMTCYLNSL 102
Query: 807 MQCLVQTP 830
+Q L TP
Sbjct: 103 VQSLYMTP 110
>Z29094-8|CAA82337.1| 254|Caenorhabditis elegans Hypothetical
protein C07A9.10 protein.
Length = 254
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 684 FSIIETISKDPLSKGKDKAMVNLGRVRGLXNLGNTCFFNSVMQCLVQTPY 833
F TIS PL + + + L NLG+ CF N ++Q L ++ +
Sbjct: 80 FQANATISGPPLVLPRPVKIHHASSYLSLRNLGDDCFMNVILQLLKRSSF 129
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily assigned
gene nameprotein 177 protein.
Length = 1667
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 718 RGSFDIVSIIEKSLVSNGNSIGGNDLTVLLARNCFL 611
+GS D++ I+EKSL S+ +SI + L FL
Sbjct: 1204 KGSEDVLEILEKSLKSSDSSIYNSQLVFACTAGLFL 1239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,310,886
Number of Sequences: 27780
Number of extensions: 385515
Number of successful extensions: 1004
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3735997402
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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