Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_G08
(1306 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 243 9e-63
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 125 2e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 4e-18
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 90 1e-16
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 81 5e-14
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 78 4e-13
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 6e-13
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 6e-09
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 5e-07
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 56 2e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 54 6e-06
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 46 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.007
UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3; ... 40 0.19
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 36 2.3
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 36 3.1
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 36 3.1
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 5.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 9.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 243 bits (594), Expect = 9e-63
Identities = 113/125 (90%), Positives = 115/125 (92%)
Frame = +2
Query: 485 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 665 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTXAPYPVTIVLSP 844
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPT APYPVTIVLSP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 845 TR*ET 859
TR +T
Sbjct: 122 TRKDT 126
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 125 bits (302), Expect = 2e-27
Identities = 72/116 (62%), Positives = 77/116 (66%)
Frame = +2
Query: 329 VCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRPGTVK 508
+C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE---I 77
Query: 509 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 676
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 4e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 503 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 89.8 bits (213), Expect = 1e-16
Identities = 49/94 (52%), Positives = 52/94 (55%)
Frame = +2
Query: 578 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 757
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 758 SFAPSWAVCTNPPFSPTXAPYPVTIVLSPTR*ET 859
SFAPSWAV NPPFSPT APYPVT+ LSPTR T
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKST 116
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 81.4 bits (192), Expect = 5e-14
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +1
Query: 781 VHEPPVQPDRCALSGNYRLESNPVRNXLSPLAAATGNRI 897
+HEPPVQPDRCALSGNYRLESNPVR+ LSPLAAATGNRI
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRI 39
Score = 41.5 bits (93), Expect = 0.047
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 906 RYVGGAXXFLXWWPNYG*TKK-XYXVSXXX*TXYFGKKL 1019
RYVGGA FL WWPNYG T++ + + FGK++
Sbjct: 43 RYVGGATEFLKWWPNYGYTRRTVFGICALLKPVTFGKRV 81
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 78.2 bits (184), Expect = 4e-13
Identities = 40/82 (48%), Positives = 49/82 (59%)
Frame = -1
Query: 871 VAIXRFLPGWTQDDSYXXXXXXXXXXXXXAHSPAWSERPTPN*DTYSVSYEKAPRFPKGE 692
+A R PGWTQDDSY A+SPAWSERP P+ DT SVSYEKAPRFPKG+
Sbjct: 1 MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Query: 691 RRTGIR*AAGSEQESARGSFQG 626
+ + +G Q R + +G
Sbjct: 61 KAEQV---SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -2
Query: 696 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 577
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 6e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 643 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 753
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 6e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 493 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 380
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 5e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 392 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 565
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 566 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 56.0 bits (129), Expect = 2e-06
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1
Query: 871 VAIXRFLPGWTQDDSYXXXXXXXXXXXXXAHSPAWSERPTPN 746
+A+ R LPGWTQDDSY AHSPAWSERPTPN
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 54.4 bits (125), Expect = 6e-06
Identities = 31/57 (54%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 293 CINXSANARGXAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 460
CI A AR AV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 46.4 bits (105), Expect = 0.002
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 782 CTNPPFSPTXAPYPVTIVLSPTR*ETXYRHWQ 877
CTN PFSPT P VT++L+PT +T RHW+
Sbjct: 68 CTNSPFSPTITPVQVTVLLNPTLTDTQKRHWR 99
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 46.4 bits (105), Expect = 0.002
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = -1
Query: 871 VAIXRFLPGWTQDDSYXXXXXXXXXXXXXAHSPAWSERPTPN*DT 737
+A R PGWTQ +SY A+SPAWSERPTP+ DT
Sbjct: 1 MAFYRAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.007
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 412 HSKAVIRLSTESGDNAGKNM 471
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Plasmid
ColE1
Length = 96
Score = 39.5 bits (88), Expect = 0.19
Identities = 26/45 (57%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -3
Query: 962 SLXVVRPPXQEXXSTAY-IPRXXILLPVAAASGDXSFLTGLDSRR 831
S+ VV P QE ST I I LPVAAASG + LTGLDSRR
Sbjct: 52 SVAVVGPLLQELCSTVCAIIALLIRLPVAAASGVKACLTGLDSRR 96
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 35.9 bits (79), Expect = 2.3
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2
Query: 363 ERGSGRAPNTQTAXPRALADXLMQ 292
+R + APNTQTA PRALAD LMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.5 bits (78), Expect = 3.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 291 SALMXRPTRGEXRFAYW 341
+ALM RPTRGE RFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 35.5 bits (78), Expect = 3.1
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = +2
Query: 578 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 757
+RG T Q D R P +CA RP R D C ++ WR HAVG
Sbjct: 638 LRGPATGQAVVDPGRMPRPV-TCA--GRPTRGLDLCGLATVSWVWRSTKCHAVG------ 688
Query: 758 SFAPSWAVCTNPPFSPTXAPYP 823
++P + CT P S APYP
Sbjct: 689 KYSPP-STCTRRPKSQRDAPYP 709
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 5.3
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 723 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 619
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 9.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 502 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 380
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,883,477
Number of Sequences: 1657284
Number of extensions: 16950191
Number of successful extensions: 47022
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 44154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46977
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 134034067229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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