Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_G06
         (1315 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P05143 Cluster: Proline-rich protein 2 precursor; n=10;...    35   4.1  
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M...    34   9.4  

>UniRef50_P05143 Cluster: Proline-rich protein 2 precursor; n=10;
           Deuterostomia|Rep: Proline-rich protein 2 precursor -
           Mus musculus (Mouse)
          Length = 317

 Score = 35.1 bits (77), Expect = 4.1
 Identities = 34/120 (28%), Positives = 39/120 (32%), Gaps = 4/120 (3%)
 Frame = +3

Query: 594 PXGPXPPNXPXKXQXXIKXGXXPKXXKTPRXFPXETPXPXKXXXXXXXXXNPXXLXPXXK 773
           P GP PP  P   Q     G  P     PR  P + P P            P    P  +
Sbjct: 133 PQGPPPPGGP---QQRPPQGPPPPGGPQPR--PPQGPPPPAGPQPRPPQGPPPPAGPHLR 187

Query: 774 X--GPL*KGXASGXQXGXSPTPXXGVXPKXPG*PKPPXP*XXXPFXVQP--GKNPXPXKG 941
              GP   G     +   SP P  G  P+ P  P PP      P    P  G  P P +G
Sbjct: 188 PTQGPPPTGGPQ-QRYPQSPPPPGGPQPRPPQGPPPPGGPHPRPTQGPPPTGPQPRPTQG 246


>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
            Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
            Emericella nidulans (Aspergillus nidulans)
          Length = 1790

 Score = 33.9 bits (74), Expect = 9.4
 Identities = 17/53 (32%), Positives = 17/53 (32%)
 Frame = -3

Query: 485  PXPXPXPVPXSGGXGXRXPXGXGTXXXLXXPXXXSXAVAGXXXPXPXPPXPPG 327
            P P P P P  G  G   P           P        G   P P PP PPG
Sbjct: 1053 PPPPPPPPPPGGLGGPPPPPPPPPPGGFGGPPPPPPPPGGFGGPPPPPPPPPG 1105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,724,425
Number of Sequences: 1657284
Number of extensions: 7399111
Number of successful extensions: 31341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26386
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 135248877506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)